Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.65■□□□□ 0.42
Krt1P04104 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Krt1P04104 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.65■□□□□ 0.42
Krt1P04104 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt1P04104 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt1P04104 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Krt1P04104 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Krt1P04104 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Krt1P04104 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Krt1P04104 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt1P04104 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt1P04104 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Krt1P04104 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Krt1P04104 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt1P04104 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.64■□□□□ 0.41
Krt1P04104 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.64■□□□□ 0.41
Krt1P04104 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Krt1P04104 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Krt1P04104 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt1P04104 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt1P04104 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt1P04104 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt1P04104 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Krt1P04104 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Krt1P04104 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.63■□□□□ 0.41
Krt1P04104 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt1P04104 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt1P04104 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.63■□□□□ 0.41
Krt1P04104 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.63■□□□□ 0.41
Krt1P04104 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Krt1P04104 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Krt1P04104 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt1P04104 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt1P04104 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt1P04104 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Krt1P04104 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Krt1P04104 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Krt1P04104 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Krt1P04104 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt1P04104 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt1P04104 Fst-202ENSMUST00000223640 2612 ntBASIC17.62■□□□□ 0.41
Krt1P04104 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt1P04104 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt1P04104 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.62■□□□□ 0.41
Krt1P04104 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt1P04104 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt1P04104 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt1P04104 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt1P04104 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Krt1P04104 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Krt1P04104 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt1P04104 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt1P04104 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt1P04104 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt1P04104 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Krt1P04104 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Krt1P04104 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt1P04104 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.61■□□□□ 0.41
Krt1P04104 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt1P04104 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Krt1P04104 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt1P04104 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Krt1P04104 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt1P04104 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt1P04104 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt1P04104 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt1P04104 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.6■□□□□ 0.41
Krt1P04104 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
Krt1P04104 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Krt1P04104 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt1P04104 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Krt1P04104 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt1P04104 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt1P04104 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Krt1P04104 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt1P04104 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt1P04104 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt1P04104 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt1P04104 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt1P04104 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Krt1P04104 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Krt1P04104 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Krt1P04104 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Krt1P04104 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Krt1P04104 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Krt1P04104 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Krt1P04104 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.59■□□□□ 0.41
Krt1P04104 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.59■□□□□ 0.41
Krt1P04104 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.59■□□□□ 0.41
Krt1P04104 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Krt1P04104 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Krt1P04104 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Krt1P04104 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Krt1P04104 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Krt1P04104 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Krt1P04104 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Krt1P04104 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Krt1P04104 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Krt1P04104 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Krt1P04104 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms