Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
P01852 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
P01852 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.94■□□□□ 0.3
P01852 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
P01852 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
P01852 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
P01852 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.94■□□□□ 0.3
P01852 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
P01852 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P01852 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P01852 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P01852 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P01852 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
P01852 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P01852 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
P01852 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
P01852 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P01852 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
P01852 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.93■□□□□ 0.3
P01852 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
P01852 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.93■□□□□ 0.3
P01852 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
P01852 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
P01852 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P01852 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
P01852 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P01852 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P01852 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
P01852 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P01852 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
P01852 Gm7290-201ENSMUST00000104990 617 ntBASIC16.92■□□□□ 0.3
P01852 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.92■□□□□ 0.3
P01852 Gm12918-201ENSMUST00000120234 636 ntBASIC16.92■□□□□ 0.3
P01852 Gm15710-201ENSMUST00000121821 636 ntBASIC16.92■□□□□ 0.3
P01852 Gm5075-201ENSMUST00000196916 622 ntBASIC16.92■□□□□ 0.3
P01852 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.92■□□□□ 0.3
P01852 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.92■□□□□ 0.3
P01852 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.92■□□□□ 0.3
P01852 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
P01852 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P01852 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
P01852 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.92■□□□□ 0.3
P01852 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P01852 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P01852 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.91■□□□□ 0.3
P01852 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.91■□□□□ 0.3
P01852 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P01852 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P01852 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P01852 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P01852 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.91■□□□□ 0.3
P01852 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
P01852 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
P01852 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.91■□□□□ 0.3
P01852 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
P01852 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.91■□□□□ 0.3
P01852 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
P01852 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P01852 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
P01852 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
P01852 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
P01852 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.91■□□□□ 0.3
P01852 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
P01852 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
P01852 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.91■□□□□ 0.3
P01852 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
P01852 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
P01852 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
P01852 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
P01852 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
P01852 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
P01852 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
P01852 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
P01852 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
P01852 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P01852 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P01852 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.9■□□□□ 0.3
P01852 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.9■□□□□ 0.3
P01852 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
P01852 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
P01852 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
P01852 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P01852 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P01852 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
P01852 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
P01852 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.9■□□□□ 0.3
P01852 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P01852 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P01852 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
P01852 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
P01852 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01852 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
P01852 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
P01852 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.89■□□□□ 0.29
P01852 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01852 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
P01852 Mir5133-201ENSMUST00000174955 77 ntBASIC16.89■□□□□ 0.29
P01852 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.89■□□□□ 0.29
P01852 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P01852 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms