Protein–RNA interactions for Protein: A3KMP2

Ttc38, Tetratricopeptide repeat protein 38, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc38A3KMP2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc38A3KMP2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.29■□□□□ 0.84
Ttc38A3KMP2 Gm10033-202ENSMUST00000211874 928 ntBASIC20.29■□□□□ 0.84
Ttc38A3KMP2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Ttc38A3KMP2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.29■□□□□ 0.84
Ttc38A3KMP2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc38A3KMP2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc38A3KMP2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc38A3KMP2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc38A3KMP2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc38A3KMP2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc38A3KMP2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc38A3KMP2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc38A3KMP2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Ttc38A3KMP2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc38A3KMP2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc38A3KMP2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ttc38A3KMP2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ttc38A3KMP2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.27■□□□□ 0.84
Ttc38A3KMP2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ttc38A3KMP2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.27■□□□□ 0.84
Ttc38A3KMP2 Gm42642-201ENSMUST00000200683 355 ntBASIC20.27■□□□□ 0.84
Ttc38A3KMP2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ttc38A3KMP2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ttc38A3KMP2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ttc38A3KMP2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ttc38A3KMP2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ttc38A3KMP2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ttc38A3KMP2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ttc38A3KMP2 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.26■□□□□ 0.83
Ttc38A3KMP2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ttc38A3KMP2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ttc38A3KMP2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc38A3KMP2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc38A3KMP2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc38A3KMP2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc38A3KMP2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc38A3KMP2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc38A3KMP2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc38A3KMP2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc38A3KMP2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc38A3KMP2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ttc38A3KMP2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc38A3KMP2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc38A3KMP2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc38A3KMP2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc38A3KMP2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
Ttc38A3KMP2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ttc38A3KMP2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc38A3KMP2 Gm18671-201ENSMUST00000214826 683 ntBASIC20.24■□□□□ 0.83
Ttc38A3KMP2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc38A3KMP2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc38A3KMP2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Ttc38A3KMP2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc38A3KMP2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc38A3KMP2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc38A3KMP2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc38A3KMP2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc38A3KMP2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc38A3KMP2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc38A3KMP2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Ttc38A3KMP2 Gm18284-201ENSMUST00000172604 624 ntBASIC20.23■□□□□ 0.83
Ttc38A3KMP2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc38A3KMP2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc38A3KMP2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc38A3KMP2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc38A3KMP2 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.22■□□□□ 0.83
Ttc38A3KMP2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc38A3KMP2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc38A3KMP2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Ttc38A3KMP2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc38A3KMP2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.22■□□□□ 0.83
Ttc38A3KMP2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc38A3KMP2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc38A3KMP2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.22■□□□□ 0.83
Ttc38A3KMP2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc38A3KMP2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.22■□□□□ 0.83
Ttc38A3KMP2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc38A3KMP2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ttc38A3KMP2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.22■□□□□ 0.83
Ttc38A3KMP2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc38A3KMP2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc38A3KMP2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.21■□□□□ 0.83
Ttc38A3KMP2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ttc38A3KMP2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc38A3KMP2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc38A3KMP2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc38A3KMP2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
Ttc38A3KMP2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc38A3KMP2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc38A3KMP2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc38A3KMP2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ttc38A3KMP2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc38A3KMP2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc38A3KMP2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc38A3KMP2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ttc38A3KMP2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc38A3KMP2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ttc38A3KMP2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Ttc38A3KMP2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms