Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-2A0A0G2JF93 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-2A0A0G2JF93 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-2A0A0G2JF93 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-2A0A0G2JF93 AA386476-201ENSMUST00000098781 1665 ntBASIC12.34□□□□□ -0.43
Trav13n-2A0A0G2JF93 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-2A0A0G2JF93 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-2A0A0G2JF93 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-2A0A0G2JF93 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-2A0A0G2JF93 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-2A0A0G2JF93 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav13n-2A0A0G2JF93 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-2A0A0G2JF93 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav13n-2A0A0G2JF93 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav13n-2A0A0G2JF93 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav13n-2A0A0G2JF93 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-2A0A0G2JF93 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-2A0A0G2JF93 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-2A0A0G2JF93 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-2A0A0G2JF93 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-2A0A0G2JF93 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav13n-2A0A0G2JF93 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-2A0A0G2JF93 Gm16464-201ENSMUST00000117815 1095 ntBASIC12.33□□□□□ -0.44
Trav13n-2A0A0G2JF93 Gm5067-201ENSMUST00000170449 1009 ntBASIC12.33□□□□□ -0.44
Trav13n-2A0A0G2JF93 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-2A0A0G2JF93 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-2A0A0G2JF93 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-2A0A0G2JF93 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav13n-2A0A0G2JF93 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav13n-2A0A0G2JF93 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-2A0A0G2JF93 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-2A0A0G2JF93 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav13n-2A0A0G2JF93 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-2A0A0G2JF93 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-2A0A0G2JF93 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-2A0A0G2JF93 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-2A0A0G2JF93 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav13n-2A0A0G2JF93 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-2A0A0G2JF93 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-2A0A0G2JF93 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav13n-2A0A0G2JF93 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav13n-2A0A0G2JF93 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-2A0A0G2JF93 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-2A0A0G2JF93 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.32□□□□□ -0.44
Trav13n-2A0A0G2JF93 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav13n-2A0A0G2JF93 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-2A0A0G2JF93 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-2A0A0G2JF93 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC12.32□□□□□ -0.44
Trav13n-2A0A0G2JF93 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav13n-2A0A0G2JF93 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-2A0A0G2JF93 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-2A0A0G2JF93 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-2A0A0G2JF93 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-2A0A0G2JF93 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-2A0A0G2JF93 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-2A0A0G2JF93 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-2A0A0G2JF93 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-2A0A0G2JF93 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav13n-2A0A0G2JF93 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-2A0A0G2JF93 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
Trav13n-2A0A0G2JF93 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-2A0A0G2JF93 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-2A0A0G2JF93 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav13n-2A0A0G2JF93 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-2A0A0G2JF93 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-2A0A0G2JF93 Gm10399-202ENSMUST00000202768 748 ntBASIC12.31□□□□□ -0.44
Trav13n-2A0A0G2JF93 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-2A0A0G2JF93 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-2A0A0G2JF93 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav13n-2A0A0G2JF93 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-2A0A0G2JF93 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-2A0A0G2JF93 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-2A0A0G2JF93 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-2A0A0G2JF93 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-2A0A0G2JF93 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-2A0A0G2JF93 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-2A0A0G2JF93 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-2A0A0G2JF93 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-2A0A0G2JF93 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-2A0A0G2JF93 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-2A0A0G2JF93 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-2A0A0G2JF93 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav13n-2A0A0G2JF93 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-2A0A0G2JF93 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav13n-2A0A0G2JF93 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-2A0A0G2JF93 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-2A0A0G2JF93 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav13n-2A0A0G2JF93 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-2A0A0G2JF93 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-2A0A0G2JF93 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-2A0A0G2JF93 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-2A0A0G2JF93 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-2A0A0G2JF93 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav13n-2A0A0G2JF93 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.29□□□□□ -0.44
Trav13n-2A0A0G2JF93 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav13n-2A0A0G2JF93 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-2A0A0G2JF93 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-2A0A0G2JF93 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-2A0A0G2JF93 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13n-2A0A0G2JF93 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms