Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TRAV34A0A0B4J273 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV34A0A0B4J273 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV34A0A0B4J273 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV34A0A0B4J273 ATP5G2P3-201ENST00000429083 425 ntBASIC16.29■□□□□ 0.2
TRAV34A0A0B4J273 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV34A0A0B4J273 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV34A0A0B4J273 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV34A0A0B4J273 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV34A0A0B4J273 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV34A0A0B4J273 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV34A0A0B4J273 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV34A0A0B4J273 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV34A0A0B4J273 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV34A0A0B4J273 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
TRAV34A0A0B4J273 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV34A0A0B4J273 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAV34A0A0B4J273 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRAV34A0A0B4J273 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV34A0A0B4J273 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV34A0A0B4J273 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV34A0A0B4J273 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV34A0A0B4J273 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAV34A0A0B4J273 HSD17B1P1-201ENST00000590052 955 ntBASIC16.28■□□□□ 0.2
TRAV34A0A0B4J273 NTF6A-201ENST00000591175 560 ntBASIC16.28■□□□□ 0.2
TRAV34A0A0B4J273 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.28■□□□□ 0.2
TRAV34A0A0B4J273 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV34A0A0B4J273 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV34A0A0B4J273 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV34A0A0B4J273 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV34A0A0B4J273 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV34A0A0B4J273 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV34A0A0B4J273 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV34A0A0B4J273 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRAV34A0A0B4J273 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV34A0A0B4J273 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAV34A0A0B4J273 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV34A0A0B4J273 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TRAV34A0A0B4J273 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TRAV34A0A0B4J273 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV34A0A0B4J273 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV34A0A0B4J273 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV34A0A0B4J273 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV34A0A0B4J273 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV34A0A0B4J273 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV34A0A0B4J273 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV34A0A0B4J273 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV34A0A0B4J273 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV34A0A0B4J273 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV34A0A0B4J273 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV34A0A0B4J273 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV34A0A0B4J273 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TRAV34A0A0B4J273 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRAV34A0A0B4J273 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV34A0A0B4J273 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV34A0A0B4J273 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV34A0A0B4J273 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.26■□□□□ 0.19
TRAV34A0A0B4J273 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV34A0A0B4J273 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV34A0A0B4J273 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV34A0A0B4J273 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV34A0A0B4J273 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.26■□□□□ 0.19
TRAV34A0A0B4J273 AC104564.3-201ENST00000582367 638 ntBASIC16.26■□□□□ 0.19
TRAV34A0A0B4J273 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRAV34A0A0B4J273 MIR6722-201ENST00000617286 78 ntBASIC16.26■□□□□ 0.19
TRAV34A0A0B4J273 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV34A0A0B4J273 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV34A0A0B4J273 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV34A0A0B4J273 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV34A0A0B4J273 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV34A0A0B4J273 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV34A0A0B4J273 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV34A0A0B4J273 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV34A0A0B4J273 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV34A0A0B4J273 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TRAV34A0A0B4J273 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV34A0A0B4J273 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV34A0A0B4J273 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV34A0A0B4J273 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV34A0A0B4J273 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV34A0A0B4J273 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV34A0A0B4J273 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV34A0A0B4J273 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV34A0A0B4J273 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV34A0A0B4J273 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.25■□□□□ 0.19
TRAV34A0A0B4J273 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV34A0A0B4J273 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV34A0A0B4J273 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV34A0A0B4J273 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRAV34A0A0B4J273 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV34A0A0B4J273 FEM1AP1-201ENST00000431297 1995 ntBASIC16.24■□□□□ 0.19
TRAV34A0A0B4J273 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
TRAV34A0A0B4J273 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV34A0A0B4J273 AC009102.2-201ENST00000606772 1639 ntBASIC16.24■□□□□ 0.19
TRAV34A0A0B4J273 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV34A0A0B4J273 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV34A0A0B4J273 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV34A0A0B4J273 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV34A0A0B4J273 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.24■□□□□ 0.19
TRAV34A0A0B4J273 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms