Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv5A0A0B4J1G9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv5A0A0B4J1G9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv5A0A0B4J1G9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv5A0A0B4J1G9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv5A0A0B4J1G9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Trbv5A0A0B4J1G9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trbv5A0A0B4J1G9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.99□□□□□ -0.01
Trbv5A0A0B4J1G9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv5A0A0B4J1G9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv5A0A0B4J1G9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.99□□□□□ -0.01
Trbv5A0A0B4J1G9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv5A0A0B4J1G9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv5A0A0B4J1G9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv5A0A0B4J1G9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv5A0A0B4J1G9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv5A0A0B4J1G9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.99□□□□□ -0.01
Trbv5A0A0B4J1G9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv5A0A0B4J1G9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv5A0A0B4J1G9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv5A0A0B4J1G9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv5A0A0B4J1G9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.98□□□□□ -0.01
Trbv5A0A0B4J1G9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv5A0A0B4J1G9 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.98□□□□□ -0.01
Trbv5A0A0B4J1G9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trbv5A0A0B4J1G9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trbv5A0A0B4J1G9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv5A0A0B4J1G9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv5A0A0B4J1G9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv5A0A0B4J1G9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv5A0A0B4J1G9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv5A0A0B4J1G9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv5A0A0B4J1G9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv5A0A0B4J1G9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trbv5A0A0B4J1G9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv5A0A0B4J1G9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Trbv5A0A0B4J1G9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trbv5A0A0B4J1G9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv5A0A0B4J1G9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv5A0A0B4J1G9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv5A0A0B4J1G9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv5A0A0B4J1G9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv5A0A0B4J1G9 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.97□□□□□ -0.01
Trbv5A0A0B4J1G9 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.97□□□□□ -0.01
Trbv5A0A0B4J1G9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trbv5A0A0B4J1G9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.97□□□□□ -0.01
Trbv5A0A0B4J1G9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.97□□□□□ -0.01
Trbv5A0A0B4J1G9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv5A0A0B4J1G9 Gm9870-201ENSMUST00000063874 645 ntBASIC14.97□□□□□ -0.01
Trbv5A0A0B4J1G9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.97□□□□□ -0.01
Trbv5A0A0B4J1G9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv5A0A0B4J1G9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv5A0A0B4J1G9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv5A0A0B4J1G9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv5A0A0B4J1G9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Trbv5A0A0B4J1G9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv5A0A0B4J1G9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.96□□□□□ -0.01
Trbv5A0A0B4J1G9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv5A0A0B4J1G9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv5A0A0B4J1G9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv5A0A0B4J1G9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Trbv5A0A0B4J1G9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv5A0A0B4J1G9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv5A0A0B4J1G9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv5A0A0B4J1G9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv5A0A0B4J1G9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv5A0A0B4J1G9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv5A0A0B4J1G9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trbv5A0A0B4J1G9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv5A0A0B4J1G9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv5A0A0B4J1G9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv5A0A0B4J1G9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trbv5A0A0B4J1G9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trbv5A0A0B4J1G9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trbv5A0A0B4J1G9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv5A0A0B4J1G9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv5A0A0B4J1G9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv5A0A0B4J1G9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv5A0A0B4J1G9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv5A0A0B4J1G9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv5A0A0B4J1G9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trbv5A0A0B4J1G9 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.95□□□□□ -0.02
Trbv5A0A0B4J1G9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv5A0A0B4J1G9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trbv5A0A0B4J1G9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.95□□□□□ -0.02
Trbv5A0A0B4J1G9 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.95□□□□□ -0.02
Trbv5A0A0B4J1G9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv5A0A0B4J1G9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv5A0A0B4J1G9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv5A0A0B4J1G9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.94□□□□□ -0.02
Trbv5A0A0B4J1G9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv5A0A0B4J1G9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv5A0A0B4J1G9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv5A0A0B4J1G9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv5A0A0B4J1G9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
Trbv5A0A0B4J1G9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv5A0A0B4J1G9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.94□□□□□ -0.02
Trbv5A0A0B4J1G9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv5A0A0B4J1G9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv5A0A0B4J1G9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms