Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-6A0A075B603 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-6A0A075B603 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav6-6A0A075B603 Gm12922-201ENSMUST00000120626 809 ntBASIC13.85□□□□□ -0.19
Trav6-6A0A075B603 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC13.85□□□□□ -0.19
Trav6-6A0A075B603 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
Trav6-6A0A075B603 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-6A0A075B603 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-6A0A075B603 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-6A0A075B603 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-6A0A075B603 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-6A0A075B603 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav6-6A0A075B603 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav6-6A0A075B603 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-6A0A075B603 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-6A0A075B603 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-6A0A075B603 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-6A0A075B603 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC13.84□□□□□ -0.19
Trav6-6A0A075B603 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav6-6A0A075B603 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-6A0A075B603 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Trav6-6A0A075B603 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-6A0A075B603 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-6A0A075B603 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav6-6A0A075B603 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC13.84□□□□□ -0.19
Trav6-6A0A075B603 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav6-6A0A075B603 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-6A0A075B603 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
Trav6-6A0A075B603 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-6A0A075B603 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6-6A0A075B603 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6-6A0A075B603 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-6A0A075B603 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-6A0A075B603 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav6-6A0A075B603 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav6-6A0A075B603 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC13.83□□□□□ -0.2
Trav6-6A0A075B603 Golgb1-201ENSMUST00000023534 498 ntBASIC13.83□□□□□ -0.2
Trav6-6A0A075B603 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav6-6A0A075B603 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-6A0A075B603 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-6A0A075B603 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-6A0A075B603 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-6A0A075B603 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-6A0A075B603 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trav6-6A0A075B603 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-6A0A075B603 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-6A0A075B603 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav6-6A0A075B603 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-6A0A075B603 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-6A0A075B603 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav6-6A0A075B603 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-6A0A075B603 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.82□□□□□ -0.2
Trav6-6A0A075B603 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-6A0A075B603 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav6-6A0A075B603 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-6A0A075B603 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-6A0A075B603 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-6A0A075B603 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-6A0A075B603 Gm15853-202ENSMUST00000195518 2041 ntBASIC13.82□□□□□ -0.2
Trav6-6A0A075B603 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC13.82□□□□□ -0.2
Trav6-6A0A075B603 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav6-6A0A075B603 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav6-6A0A075B603 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-6A0A075B603 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-6A0A075B603 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-6A0A075B603 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Trav6-6A0A075B603 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.82□□□□□ -0.2
Trav6-6A0A075B603 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-6A0A075B603 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-6A0A075B603 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-6A0A075B603 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-6A0A075B603 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav6-6A0A075B603 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-6A0A075B603 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav6-6A0A075B603 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav6-6A0A075B603 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav6-6A0A075B603 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav6-6A0A075B603 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-6A0A075B603 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-6A0A075B603 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-6A0A075B603 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-6A0A075B603 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Trav6-6A0A075B603 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-6A0A075B603 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-6A0A075B603 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-6A0A075B603 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav6-6A0A075B603 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.81□□□□□ -0.2
Trav6-6A0A075B603 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-6A0A075B603 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-6A0A075B603 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav6-6A0A075B603 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.8□□□□□ -0.2
Trav6-6A0A075B603 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav6-6A0A075B603 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-6A0A075B603 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-6A0A075B603 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-6A0A075B603 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-6A0A075B603 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-6A0A075B603 AC154266.1-201ENSMUST00000223190 503 ntBASIC13.8□□□□□ -0.2
Trav6-6A0A075B603 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-6A0A075B603 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms