Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chaf1aQ9QWF0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.85■□□□□ 0.93
Chaf1aQ9QWF0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chaf1aQ9QWF0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Chaf1aQ9QWF0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Chaf1aQ9QWF0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chaf1aQ9QWF0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chaf1aQ9QWF0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Chaf1aQ9QWF0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chaf1aQ9QWF0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chaf1aQ9QWF0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.84■□□□□ 0.93
Chaf1aQ9QWF0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chaf1aQ9QWF0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chaf1aQ9QWF0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chaf1aQ9QWF0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chaf1aQ9QWF0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chaf1aQ9QWF0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chaf1aQ9QWF0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chaf1aQ9QWF0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chaf1aQ9QWF0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Chaf1aQ9QWF0 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.83■□□□□ 0.93
Chaf1aQ9QWF0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chaf1aQ9QWF0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Chaf1aQ9QWF0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chaf1aQ9QWF0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Chaf1aQ9QWF0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.83■□□□□ 0.93
Chaf1aQ9QWF0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chaf1aQ9QWF0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.83■□□□□ 0.92
Chaf1aQ9QWF0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chaf1aQ9QWF0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chaf1aQ9QWF0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chaf1aQ9QWF0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chaf1aQ9QWF0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chaf1aQ9QWF0 Smad6-203ENSMUST00000179458 273 ntBASIC20.82■□□□□ 0.92
Chaf1aQ9QWF0 Gm43173-201ENSMUST00000202246 593 ntBASIC20.82■□□□□ 0.92
Chaf1aQ9QWF0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.82■□□□□ 0.92
Chaf1aQ9QWF0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chaf1aQ9QWF0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chaf1aQ9QWF0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Chaf1aQ9QWF0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chaf1aQ9QWF0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Chaf1aQ9QWF0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.81■□□□□ 0.92
Chaf1aQ9QWF0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chaf1aQ9QWF0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.81■□□□□ 0.92
Chaf1aQ9QWF0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chaf1aQ9QWF0 Gm27454-201ENSMUST00000185090 204 ntBASIC20.81■□□□□ 0.92
Chaf1aQ9QWF0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.81■□□□□ 0.92
Chaf1aQ9QWF0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chaf1aQ9QWF0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Chaf1aQ9QWF0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chaf1aQ9QWF0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chaf1aQ9QWF0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chaf1aQ9QWF0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chaf1aQ9QWF0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chaf1aQ9QWF0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chaf1aQ9QWF0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Chaf1aQ9QWF0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chaf1aQ9QWF0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chaf1aQ9QWF0 Gm11421-201ENSMUST00000122124 294 ntBASIC20.8■□□□□ 0.92
Chaf1aQ9QWF0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chaf1aQ9QWF0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chaf1aQ9QWF0 Gm8493-201ENSMUST00000196881 489 ntBASIC20.8■□□□□ 0.92
Chaf1aQ9QWF0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Chaf1aQ9QWF0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chaf1aQ9QWF0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chaf1aQ9QWF0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chaf1aQ9QWF0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
Chaf1aQ9QWF0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chaf1aQ9QWF0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chaf1aQ9QWF0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chaf1aQ9QWF0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chaf1aQ9QWF0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chaf1aQ9QWF0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Chaf1aQ9QWF0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chaf1aQ9QWF0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.79■□□□□ 0.92
Chaf1aQ9QWF0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chaf1aQ9QWF0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.79■□□□□ 0.92
Chaf1aQ9QWF0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Chaf1aQ9QWF0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Chaf1aQ9QWF0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Chaf1aQ9QWF0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chaf1aQ9QWF0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chaf1aQ9QWF0 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.78■□□□□ 0.92
Chaf1aQ9QWF0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Chaf1aQ9QWF0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chaf1aQ9QWF0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Chaf1aQ9QWF0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.78■□□□□ 0.92
Chaf1aQ9QWF0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Chaf1aQ9QWF0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.78■□□□□ 0.92
Chaf1aQ9QWF0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.78■□□□□ 0.92
Chaf1aQ9QWF0 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.78■□□□□ 0.92
Chaf1aQ9QWF0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chaf1aQ9QWF0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chaf1aQ9QWF0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chaf1aQ9QWF0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chaf1aQ9QWF0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Chaf1aQ9QWF0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chaf1aQ9QWF0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chaf1aQ9QWF0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chaf1aQ9QWF0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms