Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcfc2Q9D968 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcfc2Q9D968 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcfc2Q9D968 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcfc2Q9D968 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
Hcfc2Q9D968 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.2□□□□□ -0.14
Hcfc2Q9D968 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.2□□□□□ -0.14
Hcfc2Q9D968 Gm15820-201ENSMUST00000201566 728 ntBASIC14.2□□□□□ -0.14
Hcfc2Q9D968 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcfc2Q9D968 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcfc2Q9D968 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.2□□□□□ -0.14
Hcfc2Q9D968 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Hcfc2Q9D968 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hcfc2Q9D968 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hcfc2Q9D968 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcfc2Q9D968 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hcfc2Q9D968 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcfc2Q9D968 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.19□□□□□ -0.14
Hcfc2Q9D968 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcfc2Q9D968 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcfc2Q9D968 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcfc2Q9D968 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcfc2Q9D968 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hcfc2Q9D968 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcfc2Q9D968 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Hcfc2Q9D968 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.19□□□□□ -0.14
Hcfc2Q9D968 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcfc2Q9D968 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcfc2Q9D968 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hcfc2Q9D968 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.19□□□□□ -0.14
Hcfc2Q9D968 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.19□□□□□ -0.14
Hcfc2Q9D968 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcfc2Q9D968 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcfc2Q9D968 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hcfc2Q9D968 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hcfc2Q9D968 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcfc2Q9D968 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC14.18□□□□□ -0.14
Hcfc2Q9D968 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.18□□□□□ -0.14
Hcfc2Q9D968 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hcfc2Q9D968 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hcfc2Q9D968 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hcfc2Q9D968 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Hcfc2Q9D968 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcfc2Q9D968 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcfc2Q9D968 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Hcfc2Q9D968 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hcfc2Q9D968 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcfc2Q9D968 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcfc2Q9D968 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hcfc2Q9D968 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hcfc2Q9D968 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hcfc2Q9D968 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hcfc2Q9D968 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hcfc2Q9D968 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hcfc2Q9D968 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcfc2Q9D968 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcfc2Q9D968 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcfc2Q9D968 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcfc2Q9D968 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcfc2Q9D968 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcfc2Q9D968 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcfc2Q9D968 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcfc2Q9D968 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hcfc2Q9D968 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcfc2Q9D968 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcfc2Q9D968 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Hcfc2Q9D968 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hcfc2Q9D968 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcfc2Q9D968 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcfc2Q9D968 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcfc2Q9D968 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcfc2Q9D968 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcfc2Q9D968 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcfc2Q9D968 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hcfc2Q9D968 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.16□□□□□ -0.14
Hcfc2Q9D968 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hcfc2Q9D968 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcfc2Q9D968 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcfc2Q9D968 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hcfc2Q9D968 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.16□□□□□ -0.14
Hcfc2Q9D968 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcfc2Q9D968 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcfc2Q9D968 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hcfc2Q9D968 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcfc2Q9D968 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcfc2Q9D968 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcfc2Q9D968 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hcfc2Q9D968 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hcfc2Q9D968 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.16□□□□□ -0.14
Hcfc2Q9D968 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcfc2Q9D968 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hcfc2Q9D968 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.15□□□□□ -0.14
Hcfc2Q9D968 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.15□□□□□ -0.14
Hcfc2Q9D968 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcfc2Q9D968 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hcfc2Q9D968 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hcfc2Q9D968 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Hcfc2Q9D968 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hcfc2Q9D968 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.15□□□□□ -0.14
Hcfc2Q9D968 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms