Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.77■□□□□ 0.92
Tube1Q9D6T1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tube1Q9D6T1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tube1Q9D6T1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.77■□□□□ 0.92
Tube1Q9D6T1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tube1Q9D6T1 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.76■□□□□ 0.91
Tube1Q9D6T1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tube1Q9D6T1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tube1Q9D6T1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tube1Q9D6T1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tube1Q9D6T1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.76■□□□□ 0.91
Tube1Q9D6T1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tube1Q9D6T1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.76■□□□□ 0.91
Tube1Q9D6T1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Tube1Q9D6T1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.76■□□□□ 0.91
Tube1Q9D6T1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tube1Q9D6T1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tube1Q9D6T1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tube1Q9D6T1 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.76■□□□□ 0.91
Tube1Q9D6T1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.75■□□□□ 0.91
Tube1Q9D6T1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Tube1Q9D6T1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tube1Q9D6T1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.75■□□□□ 0.91
Tube1Q9D6T1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tube1Q9D6T1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Tube1Q9D6T1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tube1Q9D6T1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Tube1Q9D6T1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tube1Q9D6T1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Tube1Q9D6T1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tube1Q9D6T1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Tube1Q9D6T1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tube1Q9D6T1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tube1Q9D6T1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tube1Q9D6T1 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.75■□□□□ 0.91
Tube1Q9D6T1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tube1Q9D6T1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tube1Q9D6T1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tube1Q9D6T1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tube1Q9D6T1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tube1Q9D6T1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.74■□□□□ 0.91
Tube1Q9D6T1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.74■□□□□ 0.91
Tube1Q9D6T1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tube1Q9D6T1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tube1Q9D6T1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Tube1Q9D6T1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Tube1Q9D6T1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tube1Q9D6T1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tube1Q9D6T1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Tube1Q9D6T1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tube1Q9D6T1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tube1Q9D6T1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tube1Q9D6T1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.73■□□□□ 0.91
Tube1Q9D6T1 Gm13534-201ENSMUST00000121169 513 ntBASIC20.73■□□□□ 0.91
Tube1Q9D6T1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.73■□□□□ 0.91
Tube1Q9D6T1 Gm6420-201ENSMUST00000193885 723 ntBASIC20.73■□□□□ 0.91
Tube1Q9D6T1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tube1Q9D6T1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tube1Q9D6T1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tube1Q9D6T1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tube1Q9D6T1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tube1Q9D6T1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Tube1Q9D6T1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tube1Q9D6T1 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.72■□□□□ 0.91
Tube1Q9D6T1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tube1Q9D6T1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tube1Q9D6T1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tube1Q9D6T1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tube1Q9D6T1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Tube1Q9D6T1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Tube1Q9D6T1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tube1Q9D6T1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Tube1Q9D6T1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.71■□□□□ 0.91
Tube1Q9D6T1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tube1Q9D6T1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tube1Q9D6T1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.71■□□□□ 0.91
Tube1Q9D6T1 Nespas-201ENSMUST00000143738 1083 ntBASIC20.71■□□□□ 0.91
Tube1Q9D6T1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Tube1Q9D6T1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.71■□□□□ 0.91
Tube1Q9D6T1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Tube1Q9D6T1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tube1Q9D6T1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tube1Q9D6T1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tube1Q9D6T1 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.71■□□□□ 0.91
Tube1Q9D6T1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
Tube1Q9D6T1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.91
Tube1Q9D6T1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tube1Q9D6T1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tube1Q9D6T1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tube1Q9D6T1 Gm7860-201ENSMUST00000121190 879 ntBASIC20.7■□□□□ 0.9
Tube1Q9D6T1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.7■□□□□ 0.9
Tube1Q9D6T1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tube1Q9D6T1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tube1Q9D6T1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tube1Q9D6T1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Tube1Q9D6T1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.69■□□□□ 0.9
Tube1Q9D6T1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tube1Q9D6T1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.69■□□□□ 0.9
Tube1Q9D6T1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tube1Q9D6T1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms