Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm7Q9CQQ8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.89■□□□□ 0.61
Lsm7Q9CQQ8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm7Q9CQQ8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.89■□□□□ 0.61
Lsm7Q9CQQ8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm7Q9CQQ8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.89■□□□□ 0.61
Lsm7Q9CQQ8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Lsm7Q9CQQ8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Lsm7Q9CQQ8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 Gm26524-201ENSMUST00000192339 390 ntBASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 Rab3c-203ENSMUST00000224180 967 ntBASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 Golph3-202ENSMUST00000226517 2359 ntBASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lsm7Q9CQQ8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Lsm7Q9CQQ8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
Lsm7Q9CQQ8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm7Q9CQQ8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm7Q9CQQ8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm7Q9CQQ8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm7Q9CQQ8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm7Q9CQQ8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Lsm7Q9CQQ8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm7Q9CQQ8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.87■□□□□ 0.61
Lsm7Q9CQQ8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm7Q9CQQ8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm7Q9CQQ8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.87■□□□□ 0.61
Lsm7Q9CQQ8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm7Q9CQQ8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm7Q9CQQ8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm7Q9CQQ8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lsm7Q9CQQ8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.87■□□□□ 0.61
Lsm7Q9CQQ8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm7Q9CQQ8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm7Q9CQQ8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm7Q9CQQ8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm7Q9CQQ8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.86■□□□□ 0.61
Lsm7Q9CQQ8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.86■□□□□ 0.61
Lsm7Q9CQQ8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm7Q9CQQ8 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.86■□□□□ 0.61
Lsm7Q9CQQ8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.86■□□□□ 0.61
Lsm7Q9CQQ8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm7Q9CQQ8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm7Q9CQQ8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm7Q9CQQ8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.86■□□□□ 0.61
Lsm7Q9CQQ8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm7Q9CQQ8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm7Q9CQQ8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm7Q9CQQ8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lsm7Q9CQQ8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm7Q9CQQ8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm7Q9CQQ8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm7Q9CQQ8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.85■□□□□ 0.61
Lsm7Q9CQQ8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.85■□□□□ 0.61
Lsm7Q9CQQ8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Lsm7Q9CQQ8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm7Q9CQQ8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lsm7Q9CQQ8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm7Q9CQQ8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm7Q9CQQ8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Lsm7Q9CQQ8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm7Q9CQQ8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.84■□□□□ 0.61
Lsm7Q9CQQ8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.84■□□□□ 0.61
Lsm7Q9CQQ8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Lsm7Q9CQQ8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm7Q9CQQ8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm7Q9CQQ8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm7Q9CQQ8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Lsm7Q9CQQ8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lsm7Q9CQQ8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Lsm7Q9CQQ8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.83■□□□□ 0.61
Lsm7Q9CQQ8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lsm7Q9CQQ8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lsm7Q9CQQ8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm7Q9CQQ8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm7Q9CQQ8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm7Q9CQQ8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Lsm7Q9CQQ8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm7Q9CQQ8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm7Q9CQQ8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm7Q9CQQ8 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.83■□□□□ 0.6
Lsm7Q9CQQ8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms