Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tlr3Q99MB1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tlr3Q99MB1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Tlr3Q99MB1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tlr3Q99MB1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.04■□□□□ 0.8
Tlr3Q99MB1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tlr3Q99MB1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tlr3Q99MB1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tlr3Q99MB1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.04■□□□□ 0.8
Tlr3Q99MB1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tlr3Q99MB1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tlr3Q99MB1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tlr3Q99MB1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tlr3Q99MB1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tlr3Q99MB1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.03■□□□□ 0.8
Tlr3Q99MB1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tlr3Q99MB1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tlr3Q99MB1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tlr3Q99MB1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tlr3Q99MB1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.02■□□□□ 0.8
Tlr3Q99MB1 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.02■□□□□ 0.8
Tlr3Q99MB1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.02■□□□□ 0.8
Tlr3Q99MB1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tlr3Q99MB1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tlr3Q99MB1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tlr3Q99MB1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Tlr3Q99MB1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tlr3Q99MB1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tlr3Q99MB1 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.02■□□□□ 0.8
Tlr3Q99MB1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.02■□□□□ 0.8
Tlr3Q99MB1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tlr3Q99MB1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tlr3Q99MB1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.02■□□□□ 0.8
Tlr3Q99MB1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tlr3Q99MB1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Tlr3Q99MB1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tlr3Q99MB1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tlr3Q99MB1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tlr3Q99MB1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tlr3Q99MB1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.02■□□□□ 0.79
Tlr3Q99MB1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tlr3Q99MB1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Tlr3Q99MB1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Tlr3Q99MB1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tlr3Q99MB1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tlr3Q99MB1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Tlr3Q99MB1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tlr3Q99MB1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tlr3Q99MB1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Tlr3Q99MB1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.01■□□□□ 0.79
Tlr3Q99MB1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.01■□□□□ 0.79
Tlr3Q99MB1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tlr3Q99MB1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tlr3Q99MB1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tlr3Q99MB1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tlr3Q99MB1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Tlr3Q99MB1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tlr3Q99MB1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tlr3Q99MB1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.01■□□□□ 0.79
Tlr3Q99MB1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tlr3Q99MB1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Tlr3Q99MB1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tlr3Q99MB1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tlr3Q99MB1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Tlr3Q99MB1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tlr3Q99MB1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20■□□□□ 0.79
Tlr3Q99MB1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20■□□□□ 0.79
Tlr3Q99MB1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20■□□□□ 0.79
Tlr3Q99MB1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20■□□□□ 0.79
Tlr3Q99MB1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tlr3Q99MB1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Tlr3Q99MB1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tlr3Q99MB1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tlr3Q99MB1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tlr3Q99MB1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20■□□□□ 0.79
Tlr3Q99MB1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Tlr3Q99MB1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tlr3Q99MB1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tlr3Q99MB1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tlr3Q99MB1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Tlr3Q99MB1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.99■□□□□ 0.79
Tlr3Q99MB1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tlr3Q99MB1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Tlr3Q99MB1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tlr3Q99MB1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tlr3Q99MB1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Tlr3Q99MB1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Tlr3Q99MB1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Tlr3Q99MB1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tlr3Q99MB1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tlr3Q99MB1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Tlr3Q99MB1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tlr3Q99MB1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tlr3Q99MB1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.98■□□□□ 0.79
Tlr3Q99MB1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tlr3Q99MB1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tlr3Q99MB1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.98■□□□□ 0.79
Tlr3Q99MB1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.98■□□□□ 0.79
Tlr3Q99MB1 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.98■□□□□ 0.79
Tlr3Q99MB1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms