Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdca3Q99M54 Gm22240-201ENSMUST00000175225 82 ntBASIC17.28■□□□□ 0.36
Cdca3Q99M54 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdca3Q99M54 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdca3Q99M54 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdca3Q99M54 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cdca3Q99M54 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdca3Q99M54 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdca3Q99M54 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdca3Q99M54 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdca3Q99M54 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdca3Q99M54 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.27■□□□□ 0.36
Cdca3Q99M54 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdca3Q99M54 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdca3Q99M54 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdca3Q99M54 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Cdca3Q99M54 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.27■□□□□ 0.36
Cdca3Q99M54 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Cdca3Q99M54 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdca3Q99M54 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.27■□□□□ 0.35
Cdca3Q99M54 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.26■□□□□ 0.35
Cdca3Q99M54 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdca3Q99M54 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdca3Q99M54 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdca3Q99M54 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.26■□□□□ 0.35
Cdca3Q99M54 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.26■□□□□ 0.35
Cdca3Q99M54 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdca3Q99M54 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdca3Q99M54 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdca3Q99M54 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdca3Q99M54 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdca3Q99M54 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdca3Q99M54 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cdca3Q99M54 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdca3Q99M54 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdca3Q99M54 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdca3Q99M54 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdca3Q99M54 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.25■□□□□ 0.35
Cdca3Q99M54 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdca3Q99M54 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdca3Q99M54 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Cdca3Q99M54 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.25■□□□□ 0.35
Cdca3Q99M54 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdca3Q99M54 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.25■□□□□ 0.35
Cdca3Q99M54 Gm20760-201ENSMUST00000179197 648 ntBASIC17.25■□□□□ 0.35
Cdca3Q99M54 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.25■□□□□ 0.35
Cdca3Q99M54 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdca3Q99M54 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdca3Q99M54 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdca3Q99M54 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdca3Q99M54 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cdca3Q99M54 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cdca3Q99M54 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdca3Q99M54 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdca3Q99M54 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdca3Q99M54 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdca3Q99M54 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdca3Q99M54 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdca3Q99M54 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdca3Q99M54 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdca3Q99M54 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdca3Q99M54 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.24■□□□□ 0.35
Cdca3Q99M54 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Cdca3Q99M54 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdca3Q99M54 Gm27801-201ENSMUST00000184174 223 ntBASIC17.24■□□□□ 0.35
Cdca3Q99M54 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdca3Q99M54 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.24■□□□□ 0.35
Cdca3Q99M54 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdca3Q99M54 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.24■□□□□ 0.35
Cdca3Q99M54 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdca3Q99M54 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdca3Q99M54 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdca3Q99M54 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdca3Q99M54 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdca3Q99M54 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdca3Q99M54 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cdca3Q99M54 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Cdca3Q99M54 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdca3Q99M54 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.23■□□□□ 0.35
Cdca3Q99M54 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdca3Q99M54 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Cdca3Q99M54 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdca3Q99M54 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdca3Q99M54 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdca3Q99M54 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.23■□□□□ 0.35
Cdca3Q99M54 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdca3Q99M54 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdca3Q99M54 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdca3Q99M54 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.22■□□□□ 0.35
Cdca3Q99M54 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdca3Q99M54 BC021767-201ENSMUST00000126387 1716 ntBASIC17.22■□□□□ 0.35
Cdca3Q99M54 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdca3Q99M54 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdca3Q99M54 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdca3Q99M54 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdca3Q99M54 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.22■□□□□ 0.35
Cdca3Q99M54 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdca3Q99M54 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdca3Q99M54 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cdca3Q99M54 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms