Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhga3Q91XY5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.57■□□□□ 0.24
Pcdhga3Q91XY5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhga3Q91XY5 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.57■□□□□ 0.24
Pcdhga3Q91XY5 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.57■□□□□ 0.24
Pcdhga3Q91XY5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhga3Q91XY5 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pcdhga3Q91XY5 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhga3Q91XY5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhga3Q91XY5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhga3Q91XY5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Grk6-206ENSMUST00000224995 2971 ntBASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Golph3-205ENSMUST00000228671 2842 ntBASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhga3Q91XY5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga3Q91XY5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga3Q91XY5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhga3Q91XY5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhga3Q91XY5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga3Q91XY5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.55■□□□□ 0.24
Pcdhga3Q91XY5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.55■□□□□ 0.24
Pcdhga3Q91XY5 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.55■□□□□ 0.24
Pcdhga3Q91XY5 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga3Q91XY5 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Pcdhga3Q91XY5 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga3Q91XY5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga3Q91XY5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdhga3Q91XY5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga3Q91XY5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga3Q91XY5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga3Q91XY5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga3Q91XY5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga3Q91XY5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga3Q91XY5 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga3Q91XY5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga3Q91XY5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga3Q91XY5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga3Q91XY5 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdhga3Q91XY5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga3Q91XY5 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga3Q91XY5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga3Q91XY5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga3Q91XY5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga3Q91XY5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga3Q91XY5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga3Q91XY5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhga3Q91XY5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhga3Q91XY5 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga3Q91XY5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga3Q91XY5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Pcdhga3Q91XY5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga3Q91XY5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga3Q91XY5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga3Q91XY5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga3Q91XY5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhga3Q91XY5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga3Q91XY5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhga3Q91XY5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga3Q91XY5 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga3Q91XY5 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga3Q91XY5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga3Q91XY5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhga3Q91XY5 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga3Q91XY5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga3Q91XY5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga3Q91XY5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga3Q91XY5 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga3Q91XY5 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga3Q91XY5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga3Q91XY5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Pcdhga3Q91XY5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga3Q91XY5 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhga3Q91XY5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga3Q91XY5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga3Q91XY5 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms