Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.4■□□□□ 0.7
TRUB1Q8WWH5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRUB1Q8WWH5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
TRUB1Q8WWH5 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRUB1Q8WWH5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRUB1Q8WWH5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRUB1Q8WWH5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRUB1Q8WWH5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRUB1Q8WWH5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.39■□□□□ 0.69
TRUB1Q8WWH5 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRUB1Q8WWH5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.39■□□□□ 0.69
TRUB1Q8WWH5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRUB1Q8WWH5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.39■□□□□ 0.69
TRUB1Q8WWH5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRUB1Q8WWH5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.39■□□□□ 0.69
TRUB1Q8WWH5 AC087289.5-201ENST00000586076 3175 ntBASIC19.38■□□□□ 0.69
TRUB1Q8WWH5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRUB1Q8WWH5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRUB1Q8WWH5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TRUB1Q8WWH5 OR7E47P-201ENST00000546390 1422 ntBASIC19.38■□□□□ 0.69
TRUB1Q8WWH5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.38■□□□□ 0.69
TRUB1Q8WWH5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRUB1Q8WWH5 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRUB1Q8WWH5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.38■□□□□ 0.69
TRUB1Q8WWH5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRUB1Q8WWH5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRUB1Q8WWH5 AC026471.6-201ENST00000622954 1905 ntBASIC19.37■□□□□ 0.69
TRUB1Q8WWH5 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRUB1Q8WWH5 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.37■□□□□ 0.69
TRUB1Q8WWH5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TRUB1Q8WWH5 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.37■□□□□ 0.69
TRUB1Q8WWH5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
TRUB1Q8WWH5 AL031848.2-201ENST00000607670 837 ntBASIC19.37■□□□□ 0.69
TRUB1Q8WWH5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.37■□□□□ 0.69
TRUB1Q8WWH5 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.37■□□□□ 0.69
TRUB1Q8WWH5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRUB1Q8WWH5 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRUB1Q8WWH5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.37■□□□□ 0.69
TRUB1Q8WWH5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRUB1Q8WWH5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRUB1Q8WWH5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
TRUB1Q8WWH5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRUB1Q8WWH5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.36■□□□□ 0.69
TRUB1Q8WWH5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
TRUB1Q8WWH5 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRUB1Q8WWH5 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.36■□□□□ 0.69
TRUB1Q8WWH5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRUB1Q8WWH5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.36■□□□□ 0.69
TRUB1Q8WWH5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRUB1Q8WWH5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRUB1Q8WWH5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRUB1Q8WWH5 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRUB1Q8WWH5 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.36■□□□□ 0.69
TRUB1Q8WWH5 BX664725.1-201ENST00000438252 379 ntBASIC19.36■□□□□ 0.69
TRUB1Q8WWH5 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.36■□□□□ 0.69
TRUB1Q8WWH5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRUB1Q8WWH5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.36■□□□□ 0.69
TRUB1Q8WWH5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.36■□□□□ 0.69
TRUB1Q8WWH5 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.36■□□□□ 0.69
TRUB1Q8WWH5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRUB1Q8WWH5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRUB1Q8WWH5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TRUB1Q8WWH5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRUB1Q8WWH5 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
TRUB1Q8WWH5 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRUB1Q8WWH5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRUB1Q8WWH5 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRUB1Q8WWH5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRUB1Q8WWH5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRUB1Q8WWH5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRUB1Q8WWH5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
TRUB1Q8WWH5 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.35■□□□□ 0.69
TRUB1Q8WWH5 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRUB1Q8WWH5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.35■□□□□ 0.69
TRUB1Q8WWH5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.35■□□□□ 0.69
TRUB1Q8WWH5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRUB1Q8WWH5 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRUB1Q8WWH5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.35■□□□□ 0.69
TRUB1Q8WWH5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRUB1Q8WWH5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRUB1Q8WWH5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.35■□□□□ 0.69
TRUB1Q8WWH5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRUB1Q8WWH5 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TRUB1Q8WWH5 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRUB1Q8WWH5 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.34■□□□□ 0.69
TRUB1Q8WWH5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TRUB1Q8WWH5 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRUB1Q8WWH5 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRUB1Q8WWH5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRUB1Q8WWH5 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.34■□□□□ 0.69
TRUB1Q8WWH5 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.34■□□□□ 0.69
TRUB1Q8WWH5 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRUB1Q8WWH5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRUB1Q8WWH5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRUB1Q8WWH5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.34■□□□□ 0.69
TRUB1Q8WWH5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRUB1Q8WWH5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRUB1Q8WWH5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRUB1Q8WWH5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRUB1Q8WWH5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms