Protein–RNA interactions for Protein: Q8VCS3

Fam20b, Glycosaminoglycan xylosylkinase, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam20bQ8VCS3 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.36■□□□□ 0.37
Fam20bQ8VCS3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam20bQ8VCS3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Fam20bQ8VCS3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam20bQ8VCS3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam20bQ8VCS3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam20bQ8VCS3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam20bQ8VCS3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam20bQ8VCS3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fam20bQ8VCS3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Fam20bQ8VCS3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Fam20bQ8VCS3 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.35■□□□□ 0.37
Fam20bQ8VCS3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam20bQ8VCS3 Gm9870-201ENSMUST00000063874 645 ntBASIC17.35■□□□□ 0.37
Fam20bQ8VCS3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam20bQ8VCS3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam20bQ8VCS3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam20bQ8VCS3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Fam20bQ8VCS3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.35■□□□□ 0.37
Fam20bQ8VCS3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Fam20bQ8VCS3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Fam20bQ8VCS3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fam20bQ8VCS3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.35■□□□□ 0.37
Fam20bQ8VCS3 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.34■□□□□ 0.37
Fam20bQ8VCS3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam20bQ8VCS3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Fam20bQ8VCS3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam20bQ8VCS3 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.34■□□□□ 0.37
Fam20bQ8VCS3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam20bQ8VCS3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam20bQ8VCS3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam20bQ8VCS3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fam20bQ8VCS3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Fam20bQ8VCS3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Fam20bQ8VCS3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Fam20bQ8VCS3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Fam20bQ8VCS3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Fam20bQ8VCS3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Fam20bQ8VCS3 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.33■□□□□ 0.37
Fam20bQ8VCS3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Fam20bQ8VCS3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Fam20bQ8VCS3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Fam20bQ8VCS3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.33■□□□□ 0.37
Fam20bQ8VCS3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fam20bQ8VCS3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.33■□□□□ 0.36
Fam20bQ8VCS3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.33■□□□□ 0.36
Fam20bQ8VCS3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.33■□□□□ 0.36
Fam20bQ8VCS3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Fam20bQ8VCS3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fam20bQ8VCS3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fam20bQ8VCS3 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.33■□□□□ 0.36
Fam20bQ8VCS3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fam20bQ8VCS3 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.33■□□□□ 0.36
Fam20bQ8VCS3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fam20bQ8VCS3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fam20bQ8VCS3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Fam20bQ8VCS3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fam20bQ8VCS3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Fam20bQ8VCS3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Fam20bQ8VCS3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
Fam20bQ8VCS3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fam20bQ8VCS3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fam20bQ8VCS3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fam20bQ8VCS3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fam20bQ8VCS3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Fam20bQ8VCS3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Fam20bQ8VCS3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Fam20bQ8VCS3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fam20bQ8VCS3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fam20bQ8VCS3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam20bQ8VCS3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam20bQ8VCS3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam20bQ8VCS3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam20bQ8VCS3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam20bQ8VCS3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Fam20bQ8VCS3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.31■□□□□ 0.36
Fam20bQ8VCS3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.31■□□□□ 0.36
Fam20bQ8VCS3 Gm22238-201ENSMUST00000175222 88 ntBASIC17.31■□□□□ 0.36
Fam20bQ8VCS3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.31■□□□□ 0.36
Fam20bQ8VCS3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam20bQ8VCS3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam20bQ8VCS3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam20bQ8VCS3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fam20bQ8VCS3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.31■□□□□ 0.36
Fam20bQ8VCS3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.31■□□□□ 0.36
Fam20bQ8VCS3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fam20bQ8VCS3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fam20bQ8VCS3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fam20bQ8VCS3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Fam20bQ8VCS3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fam20bQ8VCS3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Fam20bQ8VCS3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.3■□□□□ 0.36
Fam20bQ8VCS3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.3■□□□□ 0.36
Fam20bQ8VCS3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Fam20bQ8VCS3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fam20bQ8VCS3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fam20bQ8VCS3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fam20bQ8VCS3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Fam20bQ8VCS3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam20bQ8VCS3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms