Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdt1Q8R4E9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdt1Q8R4E9 Gm12527-201ENSMUST00000117967 564 ntBASIC18.03■□□□□ 0.48
Cdt1Q8R4E9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Cdt1Q8R4E9 Mir7071-201ENSMUST00000184847 69 ntBASIC18.03■□□□□ 0.48
Cdt1Q8R4E9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cdt1Q8R4E9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.03■□□□□ 0.48
Cdt1Q8R4E9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdt1Q8R4E9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.03■□□□□ 0.48
Cdt1Q8R4E9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cdt1Q8R4E9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cdt1Q8R4E9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.03■□□□□ 0.48
Cdt1Q8R4E9 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.03■□□□□ 0.48
Cdt1Q8R4E9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdt1Q8R4E9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdt1Q8R4E9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdt1Q8R4E9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdt1Q8R4E9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdt1Q8R4E9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdt1Q8R4E9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdt1Q8R4E9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cdt1Q8R4E9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdt1Q8R4E9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdt1Q8R4E9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdt1Q8R4E9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdt1Q8R4E9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cdt1Q8R4E9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdt1Q8R4E9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdt1Q8R4E9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdt1Q8R4E9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
Cdt1Q8R4E9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdt1Q8R4E9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdt1Q8R4E9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdt1Q8R4E9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cdt1Q8R4E9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdt1Q8R4E9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdt1Q8R4E9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdt1Q8R4E9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdt1Q8R4E9 Gm38205-201ENSMUST00000192243 258 ntBASIC18■□□□□ 0.47
Cdt1Q8R4E9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdt1Q8R4E9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18■□□□□ 0.47
Cdt1Q8R4E9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Cdt1Q8R4E9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18■□□□□ 0.47
Cdt1Q8R4E9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdt1Q8R4E9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdt1Q8R4E9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.99■□□□□ 0.47
Cdt1Q8R4E9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdt1Q8R4E9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdt1Q8R4E9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.99■□□□□ 0.47
Cdt1Q8R4E9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cdt1Q8R4E9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdt1Q8R4E9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.99■□□□□ 0.47
Cdt1Q8R4E9 Gm5408-201ENSMUST00000197998 747 ntBASIC17.99■□□□□ 0.47
Cdt1Q8R4E9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdt1Q8R4E9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdt1Q8R4E9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdt1Q8R4E9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdt1Q8R4E9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cdt1Q8R4E9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.99■□□□□ 0.47
Cdt1Q8R4E9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdt1Q8R4E9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdt1Q8R4E9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdt1Q8R4E9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdt1Q8R4E9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.98■□□□□ 0.47
Cdt1Q8R4E9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdt1Q8R4E9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cdt1Q8R4E9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdt1Q8R4E9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cdt1Q8R4E9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdt1Q8R4E9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Cdt1Q8R4E9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Cdt1Q8R4E9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdt1Q8R4E9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.98■□□□□ 0.47
Cdt1Q8R4E9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cdt1Q8R4E9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdt1Q8R4E9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdt1Q8R4E9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdt1Q8R4E9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.97■□□□□ 0.47
Cdt1Q8R4E9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdt1Q8R4E9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdt1Q8R4E9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdt1Q8R4E9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.97■□□□□ 0.47
Cdt1Q8R4E9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdt1Q8R4E9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdt1Q8R4E9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdt1Q8R4E9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdt1Q8R4E9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cdt1Q8R4E9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdt1Q8R4E9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cdt1Q8R4E9 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.96■□□□□ 0.47
Cdt1Q8R4E9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdt1Q8R4E9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdt1Q8R4E9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.96■□□□□ 0.47
Cdt1Q8R4E9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.96■□□□□ 0.47
Cdt1Q8R4E9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdt1Q8R4E9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdt1Q8R4E9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cdt1Q8R4E9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.96■□□□□ 0.47
Cdt1Q8R4E9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdt1Q8R4E9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms