Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne1Q8C166 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Cpne1Q8C166 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cpne1Q8C166 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne1Q8C166 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne1Q8C166 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne1Q8C166 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne1Q8C166 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne1Q8C166 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne1Q8C166 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.44■□□□□ 0.38
Cpne1Q8C166 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne1Q8C166 Gm10849-201ENSMUST00000100397 618 ntBASIC17.43■□□□□ 0.38
Cpne1Q8C166 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.43■□□□□ 0.38
Cpne1Q8C166 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Cpne1Q8C166 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.43■□□□□ 0.38
Cpne1Q8C166 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne1Q8C166 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne1Q8C166 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne1Q8C166 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.43■□□□□ 0.38
Cpne1Q8C166 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne1Q8C166 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne1Q8C166 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne1Q8C166 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne1Q8C166 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne1Q8C166 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne1Q8C166 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne1Q8C166 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Cpne1Q8C166 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cpne1Q8C166 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cpne1Q8C166 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.42■□□□□ 0.38
Cpne1Q8C166 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpne1Q8C166 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpne1Q8C166 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Cpne1Q8C166 Gm13534-201ENSMUST00000121169 513 ntBASIC17.42■□□□□ 0.38
Cpne1Q8C166 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpne1Q8C166 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpne1Q8C166 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cpne1Q8C166 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cpne1Q8C166 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cpne1Q8C166 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cpne1Q8C166 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpne1Q8C166 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpne1Q8C166 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cpne1Q8C166 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.41■□□□□ 0.38
Cpne1Q8C166 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpne1Q8C166 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpne1Q8C166 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cpne1Q8C166 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpne1Q8C166 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpne1Q8C166 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cpne1Q8C166 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.41■□□□□ 0.38
Cpne1Q8C166 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.41■□□□□ 0.38
Cpne1Q8C166 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cpne1Q8C166 Gm7514-201ENSMUST00000209475 934 ntBASIC17.41■□□□□ 0.38
Cpne1Q8C166 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.41■□□□□ 0.38
Cpne1Q8C166 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpne1Q8C166 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Cpne1Q8C166 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpne1Q8C166 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpne1Q8C166 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpne1Q8C166 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpne1Q8C166 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cpne1Q8C166 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.4■□□□□ 0.38
Cpne1Q8C166 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.4■□□□□ 0.38
Cpne1Q8C166 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cpne1Q8C166 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cpne1Q8C166 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cpne1Q8C166 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
Cpne1Q8C166 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpne1Q8C166 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cpne1Q8C166 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne1Q8C166 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Cpne1Q8C166 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.39■□□□□ 0.37
Cpne1Q8C166 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne1Q8C166 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Cpne1Q8C166 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne1Q8C166 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne1Q8C166 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpne1Q8C166 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne1Q8C166 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne1Q8C166 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne1Q8C166 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne1Q8C166 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne1Q8C166 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne1Q8C166 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne1Q8C166 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.38■□□□□ 0.37
Cpne1Q8C166 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cpne1Q8C166 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cpne1Q8C166 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne1Q8C166 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne1Q8C166 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cpne1Q8C166 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cpne1Q8C166 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne1Q8C166 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpne1Q8C166 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cpne1Q8C166 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne1Q8C166 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne1Q8C166 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne1Q8C166 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne1Q8C166 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms