Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.67■□□□□ 0.58
Usp8Q80U87 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp8Q80U87 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp8Q80U87 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp8Q80U87 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp8Q80U87 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Usp8Q80U87 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.67■□□□□ 0.58
Usp8Q80U87 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Usp8Q80U87 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Usp8Q80U87 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp8Q80U87 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp8Q80U87 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
Usp8Q80U87 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp8Q80U87 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Usp8Q80U87 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp8Q80U87 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp8Q80U87 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Usp8Q80U87 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp8Q80U87 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp8Q80U87 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp8Q80U87 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.66■□□□□ 0.58
Usp8Q80U87 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.66■□□□□ 0.58
Usp8Q80U87 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp8Q80U87 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Usp8Q80U87 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp8Q80U87 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp8Q80U87 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp8Q80U87 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp8Q80U87 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Usp8Q80U87 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp8Q80U87 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Usp8Q80U87 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp8Q80U87 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Usp8Q80U87 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp8Q80U87 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp8Q80U87 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp8Q80U87 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp8Q80U87 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp8Q80U87 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp8Q80U87 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp8Q80U87 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp8Q80U87 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp8Q80U87 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp8Q80U87 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Usp8Q80U87 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp8Q80U87 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp8Q80U87 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp8Q80U87 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp8Q80U87 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp8Q80U87 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp8Q80U87 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Usp8Q80U87 Gm45417-201ENSMUST00000209533 758 ntBASIC18.64■□□□□ 0.57
Usp8Q80U87 Gm6139-201ENSMUST00000079261 882 ntBASIC18.64■□□□□ 0.57
Usp8Q80U87 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp8Q80U87 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp8Q80U87 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp8Q80U87 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Usp8Q80U87 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp8Q80U87 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp8Q80U87 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp8Q80U87 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp8Q80U87 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp8Q80U87 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp8Q80U87 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp8Q80U87 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp8Q80U87 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp8Q80U87 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Usp8Q80U87 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp8Q80U87 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp8Q80U87 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Usp8Q80U87 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp8Q80U87 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp8Q80U87 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp8Q80U87 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp8Q80U87 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Usp8Q80U87 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.62■□□□□ 0.57
Usp8Q80U87 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp8Q80U87 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp8Q80U87 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp8Q80U87 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp8Q80U87 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.62■□□□□ 0.57
Usp8Q80U87 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp8Q80U87 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp8Q80U87 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp8Q80U87 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp8Q80U87 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp8Q80U87 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Usp8Q80U87 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp8Q80U87 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp8Q80U87 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp8Q80U87 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp8Q80U87 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp8Q80U87 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp8Q80U87 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp8Q80U87 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp8Q80U87 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.61■□□□□ 0.57
Usp8Q80U87 Gm27801-201ENSMUST00000184174 223 ntBASIC18.61■□□□□ 0.57
Usp8Q80U87 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.61■□□□□ 0.57
Usp8Q80U87 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.61■□□□□ 0.57
Usp8Q80U87 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms