Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn4bQ7M729 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn4bQ7M729 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn4bQ7M729 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn4bQ7M729 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn4bQ7M729 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn4bQ7M729 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn4bQ7M729 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Scn4bQ7M729 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.19■□□□□ 0.5
Scn4bQ7M729 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn4bQ7M729 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn4bQ7M729 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn4bQ7M729 Gm10493-201ENSMUST00000097270 612 ntBASIC18.19■□□□□ 0.5
Scn4bQ7M729 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn4bQ7M729 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn4bQ7M729 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Scn4bQ7M729 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn4bQ7M729 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.18■□□□□ 0.5
Scn4bQ7M729 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn4bQ7M729 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn4bQ7M729 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn4bQ7M729 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn4bQ7M729 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn4bQ7M729 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn4bQ7M729 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.18■□□□□ 0.5
Scn4bQ7M729 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.18■□□□□ 0.5
Scn4bQ7M729 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn4bQ7M729 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn4bQ7M729 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn4bQ7M729 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn4bQ7M729 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.18■□□□□ 0.5
Scn4bQ7M729 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Scn4bQ7M729 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn4bQ7M729 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn4bQ7M729 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.17■□□□□ 0.5
Scn4bQ7M729 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn4bQ7M729 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.17■□□□□ 0.5
Scn4bQ7M729 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn4bQ7M729 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn4bQ7M729 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.17■□□□□ 0.5
Scn4bQ7M729 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.17■□□□□ 0.5
Scn4bQ7M729 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn4bQ7M729 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn4bQ7M729 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn4bQ7M729 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn4bQ7M729 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn4bQ7M729 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn4bQ7M729 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn4bQ7M729 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn4bQ7M729 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn4bQ7M729 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn4bQ7M729 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn4bQ7M729 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.16■□□□□ 0.5
Scn4bQ7M729 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scn4bQ7M729 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Scn4bQ7M729 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Scn4bQ7M729 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scn4bQ7M729 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn4bQ7M729 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn4bQ7M729 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scn4bQ7M729 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn4bQ7M729 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn4bQ7M729 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn4bQ7M729 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn4bQ7M729 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn4bQ7M729 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn4bQ7M729 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn4bQ7M729 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn4bQ7M729 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn4bQ7M729 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn4bQ7M729 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
Scn4bQ7M729 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scn4bQ7M729 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn4bQ7M729 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn4bQ7M729 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scn4bQ7M729 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn4bQ7M729 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Scn4bQ7M729 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Scn4bQ7M729 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Scn4bQ7M729 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Scn4bQ7M729 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Scn4bQ7M729 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn4bQ7M729 Gm18284-201ENSMUST00000172604 624 ntBASIC18.14■□□□□ 0.49
Scn4bQ7M729 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Scn4bQ7M729 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.14■□□□□ 0.49
Scn4bQ7M729 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.14■□□□□ 0.49
Scn4bQ7M729 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn4bQ7M729 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn4bQ7M729 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn4bQ7M729 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.14■□□□□ 0.49
Scn4bQ7M729 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn4bQ7M729 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn4bQ7M729 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn4bQ7M729 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn4bQ7M729 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn4bQ7M729 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn4bQ7M729 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scn4bQ7M729 Gm13146-201ENSMUST00000118508 780 ntBASIC18.13■□□□□ 0.49
Scn4bQ7M729 Gm13234-201ENSMUST00000120010 747 ntBASIC18.13■□□□□ 0.49
Scn4bQ7M729 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms