Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Commd3Q63829 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Commd3Q63829 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Commd3Q63829 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Commd3Q63829 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Commd3Q63829 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Commd3Q63829 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Commd3Q63829 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Commd3Q63829 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Commd3Q63829 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Commd3Q63829 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Commd3Q63829 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Commd3Q63829 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Commd3Q63829 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Commd3Q63829 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Commd3Q63829 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Commd3Q63829 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Commd3Q63829 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Commd3Q63829 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Commd3Q63829 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Commd3Q63829 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Commd3Q63829 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Commd3Q63829 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Commd3Q63829 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Commd3Q63829 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Commd3Q63829 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Commd3Q63829 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Commd3Q63829 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.58■□□□□ 0.09
Commd3Q63829 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Commd3Q63829 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Commd3Q63829 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.58■□□□□ 0.08
Commd3Q63829 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Commd3Q63829 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Commd3Q63829 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.58■□□□□ 0.08
Commd3Q63829 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Commd3Q63829 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Commd3Q63829 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Commd3Q63829 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Commd3Q63829 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.58■□□□□ 0.08
Commd3Q63829 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.58■□□□□ 0.08
Commd3Q63829 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Commd3Q63829 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Commd3Q63829 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Commd3Q63829 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Commd3Q63829 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Commd3Q63829 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Commd3Q63829 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Commd3Q63829 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Commd3Q63829 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Commd3Q63829 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.57■□□□□ 0.08
Commd3Q63829 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Commd3Q63829 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Commd3Q63829 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Commd3Q63829 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Commd3Q63829 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Commd3Q63829 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Commd3Q63829 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Commd3Q63829 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Commd3Q63829 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Commd3Q63829 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Commd3Q63829 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Commd3Q63829 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Commd3Q63829 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Commd3Q63829 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Commd3Q63829 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Commd3Q63829 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Commd3Q63829 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Commd3Q63829 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Commd3Q63829 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Commd3Q63829 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Commd3Q63829 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Commd3Q63829 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Commd3Q63829 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Commd3Q63829 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Commd3Q63829 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Commd3Q63829 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Commd3Q63829 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Commd3Q63829 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.55■□□□□ 0.08
Commd3Q63829 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.55■□□□□ 0.08
Commd3Q63829 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Commd3Q63829 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Commd3Q63829 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Commd3Q63829 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Commd3Q63829 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Commd3Q63829 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Commd3Q63829 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Commd3Q63829 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Commd3Q63829 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Commd3Q63829 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Commd3Q63829 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Commd3Q63829 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Commd3Q63829 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Commd3Q63829 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.54■□□□□ 0.08
Commd3Q63829 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Commd3Q63829 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Commd3Q63829 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Commd3Q63829 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Commd3Q63829 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Commd3Q63829 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Commd3Q63829 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms