Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.12
Notch3Q61982 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.27□□□□□ -0.12
Notch3Q61982 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Notch3Q61982 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Notch3Q61982 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Notch3Q61982 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Notch3Q61982 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Notch3Q61982 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Notch3Q61982 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Notch3Q61982 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Notch3Q61982 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Notch3Q61982 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Notch3Q61982 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.27□□□□□ -0.12
Notch3Q61982 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Notch3Q61982 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.27□□□□□ -0.13
Notch3Q61982 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.27□□□□□ -0.13
Notch3Q61982 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Notch3Q61982 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Notch3Q61982 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Notch3Q61982 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.27□□□□□ -0.13
Notch3Q61982 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Notch3Q61982 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Notch3Q61982 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.26□□□□□ -0.13
Notch3Q61982 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Notch3Q61982 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Notch3Q61982 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Notch3Q61982 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Notch3Q61982 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Notch3Q61982 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Notch3Q61982 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Notch3Q61982 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Notch3Q61982 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Notch3Q61982 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Notch3Q61982 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Notch3Q61982 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Notch3Q61982 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Notch3Q61982 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Notch3Q61982 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Notch3Q61982 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Notch3Q61982 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Notch3Q61982 AA386476-201ENSMUST00000098781 1665 ntBASIC14.26□□□□□ -0.13
Notch3Q61982 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Notch3Q61982 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Notch3Q61982 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Notch3Q61982 Gm27275-201ENSMUST00000184318 272 ntBASIC14.25□□□□□ -0.13
Notch3Q61982 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Notch3Q61982 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Notch3Q61982 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Notch3Q61982 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Notch3Q61982 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Notch3Q61982 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Notch3Q61982 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
Notch3Q61982 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Notch3Q61982 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Notch3Q61982 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Notch3Q61982 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Notch3Q61982 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Notch3Q61982 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Notch3Q61982 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Notch3Q61982 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Notch3Q61982 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Notch3Q61982 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Notch3Q61982 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Notch3Q61982 Gm5643-201ENSMUST00000117081 966 ntBASIC14.24□□□□□ -0.13
Notch3Q61982 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.24□□□□□ -0.13
Notch3Q61982 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.24□□□□□ -0.13
Notch3Q61982 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.24□□□□□ -0.13
Notch3Q61982 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Notch3Q61982 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Notch3Q61982 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Notch3Q61982 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Notch3Q61982 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Notch3Q61982 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Notch3Q61982 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Notch3Q61982 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Notch3Q61982 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Notch3Q61982 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Notch3Q61982 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.24□□□□□ -0.13
Notch3Q61982 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Notch3Q61982 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.24□□□□□ -0.13
Notch3Q61982 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.24□□□□□ -0.13
Notch3Q61982 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Notch3Q61982 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Notch3Q61982 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.24□□□□□ -0.13
Notch3Q61982 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Notch3Q61982 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Notch3Q61982 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Notch3Q61982 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Notch3Q61982 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Notch3Q61982 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Notch3Q61982 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Notch3Q61982 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.23□□□□□ -0.13
Notch3Q61982 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Notch3Q61982 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Notch3Q61982 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Notch3Q61982 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Notch3Q61982 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Notch3Q61982 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Notch3Q61982 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Notch3Q61982 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms