Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.16■□□□□ 0.34
Clcn4Q61418 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Clcn4Q61418 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn4Q61418 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn4Q61418 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn4Q61418 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Clcn4Q61418 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Clcn4Q61418 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn4Q61418 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn4Q61418 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Clcn4Q61418 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn4Q61418 Gm10493-201ENSMUST00000097270 612 ntBASIC17.15■□□□□ 0.34
Clcn4Q61418 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn4Q61418 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn4Q61418 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn4Q61418 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn4Q61418 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn4Q61418 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn4Q61418 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.15■□□□□ 0.34
Clcn4Q61418 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Clcn4Q61418 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn4Q61418 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn4Q61418 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Clcn4Q61418 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn4Q61418 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Clcn4Q61418 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn4Q61418 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn4Q61418 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn4Q61418 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.14■□□□□ 0.33
Clcn4Q61418 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Clcn4Q61418 Gm40848-201ENSMUST00000221998 324 ntBASIC17.14■□□□□ 0.33
Clcn4Q61418 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn4Q61418 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Clcn4Q61418 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn4Q61418 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn4Q61418 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.14■□□□□ 0.33
Clcn4Q61418 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn4Q61418 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Clcn4Q61418 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn4Q61418 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Clcn4Q61418 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Clcn4Q61418 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn4Q61418 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn4Q61418 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.13■□□□□ 0.33
Clcn4Q61418 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn4Q61418 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn4Q61418 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn4Q61418 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn4Q61418 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn4Q61418 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn4Q61418 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn4Q61418 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.12■□□□□ 0.33
Clcn4Q61418 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn4Q61418 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn4Q61418 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn4Q61418 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn4Q61418 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Clcn4Q61418 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn4Q61418 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn4Q61418 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.12■□□□□ 0.33
Clcn4Q61418 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Clcn4Q61418 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn4Q61418 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn4Q61418 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn4Q61418 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn4Q61418 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn4Q61418 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn4Q61418 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn4Q61418 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn4Q61418 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn4Q61418 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Clcn4Q61418 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn4Q61418 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn4Q61418 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.11■□□□□ 0.33
Clcn4Q61418 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn4Q61418 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn4Q61418 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Clcn4Q61418 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn4Q61418 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn4Q61418 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn4Q61418 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Clcn4Q61418 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn4Q61418 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn4Q61418 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Clcn4Q61418 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn4Q61418 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn4Q61418 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn4Q61418 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn4Q61418 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn4Q61418 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.1■□□□□ 0.33
Clcn4Q61418 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn4Q61418 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.1■□□□□ 0.33
Clcn4Q61418 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.1■□□□□ 0.33
Clcn4Q61418 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn4Q61418 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn4Q61418 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Clcn4Q61418 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.1■□□□□ 0.33
Clcn4Q61418 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn4Q61418 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn4Q61418 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms