Protein–RNA interactions for Protein: Q3UZ39

Lrrfip1, Leucine-rich repeat flightless-interacting protein 1, mousemouse

Known RBP Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrfip1Q3UZ39 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrrfip1Q3UZ39 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.19■□□□□ 0.98
Lrrfip1Q3UZ39 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Lrrfip1Q3UZ39 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrrfip1Q3UZ39 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrrfip1Q3UZ39 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrrfip1Q3UZ39 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Lrrfip1Q3UZ39 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrrfip1Q3UZ39 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.18■□□□□ 0.98
Lrrfip1Q3UZ39 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.18■□□□□ 0.98
Lrrfip1Q3UZ39 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrrfip1Q3UZ39 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Lrrfip1Q3UZ39 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.18■□□□□ 0.98
Lrrfip1Q3UZ39 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrrfip1Q3UZ39 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Lrrfip1Q3UZ39 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrrfip1Q3UZ39 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Lrrfip1Q3UZ39 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Lrrfip1Q3UZ39 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrrfip1Q3UZ39 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrrfip1Q3UZ39 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lrrfip1Q3UZ39 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
Lrrfip1Q3UZ39 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrrfip1Q3UZ39 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.17■□□□□ 0.98
Lrrfip1Q3UZ39 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lrrfip1Q3UZ39 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrrfip1Q3UZ39 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrrfip1Q3UZ39 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrrfip1Q3UZ39 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrrfip1Q3UZ39 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lrrfip1Q3UZ39 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrrfip1Q3UZ39 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lrrfip1Q3UZ39 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrrfip1Q3UZ39 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrrfip1Q3UZ39 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lrrfip1Q3UZ39 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lrrfip1Q3UZ39 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lrrfip1Q3UZ39 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lrrfip1Q3UZ39 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Lrrfip1Q3UZ39 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.16■□□□□ 0.98
Lrrfip1Q3UZ39 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Lrrfip1Q3UZ39 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
Lrrfip1Q3UZ39 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lrrfip1Q3UZ39 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Lrrfip1Q3UZ39 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Lrrfip1Q3UZ39 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Lrrfip1Q3UZ39 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrrfip1Q3UZ39 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrrfip1Q3UZ39 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrrfip1Q3UZ39 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrrfip1Q3UZ39 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.15■□□□□ 0.98
Lrrfip1Q3UZ39 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrrfip1Q3UZ39 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.15■□□□□ 0.98
Lrrfip1Q3UZ39 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrrfip1Q3UZ39 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lrrfip1Q3UZ39 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrrfip1Q3UZ39 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lrrfip1Q3UZ39 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Lrrfip1Q3UZ39 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lrrfip1Q3UZ39 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Lrrfip1Q3UZ39 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lrrfip1Q3UZ39 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lrrfip1Q3UZ39 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lrrfip1Q3UZ39 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.14■□□□□ 0.97
Lrrfip1Q3UZ39 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Lrrfip1Q3UZ39 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lrrfip1Q3UZ39 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lrrfip1Q3UZ39 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lrrfip1Q3UZ39 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Lrrfip1Q3UZ39 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lrrfip1Q3UZ39 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lrrfip1Q3UZ39 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lrrfip1Q3UZ39 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lrrfip1Q3UZ39 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Lrrfip1Q3UZ39 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.13■□□□□ 0.97
Lrrfip1Q3UZ39 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.13■□□□□ 0.97
Lrrfip1Q3UZ39 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.13■□□□□ 0.97
Lrrfip1Q3UZ39 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.13■□□□□ 0.97
Lrrfip1Q3UZ39 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.13■□□□□ 0.97
Lrrfip1Q3UZ39 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lrrfip1Q3UZ39 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lrrfip1Q3UZ39 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lrrfip1Q3UZ39 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Lrrfip1Q3UZ39 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lrrfip1Q3UZ39 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lrrfip1Q3UZ39 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Lrrfip1Q3UZ39 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lrrfip1Q3UZ39 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lrrfip1Q3UZ39 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Lrrfip1Q3UZ39 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lrrfip1Q3UZ39 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lrrfip1Q3UZ39 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Lrrfip1Q3UZ39 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrrfip1Q3UZ39 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrrfip1Q3UZ39 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Lrrfip1Q3UZ39 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrrfip1Q3UZ39 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.11■□□□□ 0.97
Lrrfip1Q3UZ39 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.11■□□□□ 0.97
Lrrfip1Q3UZ39 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrrfip1Q3UZ39 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms