Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six5P70178 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Six5P70178 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six5P70178 AV356131-201ENSMUST00000206201 750 ntBASIC17.46■□□□□ 0.39
Six5P70178 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Six5P70178 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Six5P70178 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Six5P70178 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six5P70178 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.46■□□□□ 0.39
Six5P70178 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Six5P70178 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six5P70178 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Six5P70178 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six5P70178 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.45■□□□□ 0.38
Six5P70178 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Six5P70178 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six5P70178 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six5P70178 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.45■□□□□ 0.38
Six5P70178 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.45■□□□□ 0.38
Six5P70178 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six5P70178 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Six5P70178 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Six5P70178 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six5P70178 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six5P70178 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Six5P70178 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six5P70178 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six5P70178 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six5P70178 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Six5P70178 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Six5P70178 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.44■□□□□ 0.38
Six5P70178 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six5P70178 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.44■□□□□ 0.38
Six5P70178 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six5P70178 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six5P70178 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Six5P70178 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.44■□□□□ 0.38
Six5P70178 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.44■□□□□ 0.38
Six5P70178 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.44■□□□□ 0.38
Six5P70178 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six5P70178 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Six5P70178 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six5P70178 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.43■□□□□ 0.38
Six5P70178 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Six5P70178 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six5P70178 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six5P70178 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six5P70178 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six5P70178 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six5P70178 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Six5P70178 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six5P70178 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six5P70178 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six5P70178 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Six5P70178 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six5P70178 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.43■□□□□ 0.38
Six5P70178 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Six5P70178 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six5P70178 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Six5P70178 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Six5P70178 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six5P70178 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Six5P70178 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six5P70178 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six5P70178 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.42■□□□□ 0.38
Six5P70178 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Six5P70178 Gm7514-201ENSMUST00000209475 934 ntBASIC17.42■□□□□ 0.38
Six5P70178 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six5P70178 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six5P70178 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six5P70178 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six5P70178 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six5P70178 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six5P70178 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Six5P70178 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six5P70178 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six5P70178 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Six5P70178 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six5P70178 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six5P70178 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Six5P70178 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Six5P70178 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six5P70178 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six5P70178 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six5P70178 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Six5P70178 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Six5P70178 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.41■□□□□ 0.38
Six5P70178 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Six5P70178 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Six5P70178 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six5P70178 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Six5P70178 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Six5P70178 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Six5P70178 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Six5P70178 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Six5P70178 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six5P70178 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.4■□□□□ 0.38
Six5P70178 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Six5P70178 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Six5P70178 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms