Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpne2P59108 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpne2P59108 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpne2P59108 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpne2P59108 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpne2P59108 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.71■□□□□ 0.11
Cpne2P59108 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
Cpne2P59108 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpne2P59108 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cpne2P59108 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.71■□□□□ 0.11
Cpne2P59108 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpne2P59108 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpne2P59108 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cpne2P59108 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Cpne2P59108 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cpne2P59108 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Cpne2P59108 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cpne2P59108 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Cpne2P59108 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cpne2P59108 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpne2P59108 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cpne2P59108 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpne2P59108 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpne2P59108 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.7■□□□□ 0.1
Cpne2P59108 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpne2P59108 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Cpne2P59108 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.7■□□□□ 0.1
Cpne2P59108 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cpne2P59108 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpne2P59108 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpne2P59108 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cpne2P59108 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne2P59108 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.69■□□□□ 0.1
Cpne2P59108 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne2P59108 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne2P59108 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne2P59108 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne2P59108 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne2P59108 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.69■□□□□ 0.1
Cpne2P59108 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne2P59108 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne2P59108 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne2P59108 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne2P59108 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.69■□□□□ 0.1
Cpne2P59108 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne2P59108 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cpne2P59108 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cpne2P59108 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne2P59108 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.69■□□□□ 0.1
Cpne2P59108 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cpne2P59108 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne2P59108 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cpne2P59108 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne2P59108 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cpne2P59108 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cpne2P59108 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne2P59108 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne2P59108 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne2P59108 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne2P59108 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne2P59108 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne2P59108 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cpne2P59108 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne2P59108 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.68■□□□□ 0.1
Cpne2P59108 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne2P59108 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cpne2P59108 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.67■□□□□ 0.1
Cpne2P59108 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.67■□□□□ 0.1
Cpne2P59108 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne2P59108 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne2P59108 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cpne2P59108 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cpne2P59108 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne2P59108 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne2P59108 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.67■□□□□ 0.1
Cpne2P59108 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne2P59108 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cpne2P59108 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne2P59108 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne2P59108 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne2P59108 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne2P59108 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne2P59108 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cpne2P59108 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne2P59108 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne2P59108 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne2P59108 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne2P59108 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.66■□□□□ 0.1
Cpne2P59108 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cpne2P59108 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne2P59108 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne2P59108 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne2P59108 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne2P59108 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne2P59108 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne2P59108 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne2P59108 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cpne2P59108 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpne2P59108 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cpne2P59108 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms