Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NrlP54846 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NrlP54846 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NrlP54846 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NrlP54846 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NrlP54846 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.88■□□□□ 0.77
NrlP54846 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NrlP54846 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NrlP54846 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NrlP54846 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NrlP54846 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.88■□□□□ 0.77
NrlP54846 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NrlP54846 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NrlP54846 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.88■□□□□ 0.77
NrlP54846 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NrlP54846 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.88■□□□□ 0.77
NrlP54846 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NrlP54846 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NrlP54846 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NrlP54846 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.87■□□□□ 0.77
NrlP54846 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NrlP54846 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
NrlP54846 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NrlP54846 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NrlP54846 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NrlP54846 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NrlP54846 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NrlP54846 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NrlP54846 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NrlP54846 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NrlP54846 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NrlP54846 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NrlP54846 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NrlP54846 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NrlP54846 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NrlP54846 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NrlP54846 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.86■□□□□ 0.77
NrlP54846 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
NrlP54846 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NrlP54846 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NrlP54846 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NrlP54846 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NrlP54846 Dio3-201ENSMUST00000097228 1449 ntBASIC19.85■□□□□ 0.77
NrlP54846 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NrlP54846 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NrlP54846 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NrlP54846 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NrlP54846 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NrlP54846 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.85■□□□□ 0.77
NrlP54846 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.85■□□□□ 0.77
NrlP54846 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
NrlP54846 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NrlP54846 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NrlP54846 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NrlP54846 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NrlP54846 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NrlP54846 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NrlP54846 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NrlP54846 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NrlP54846 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NrlP54846 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NrlP54846 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NrlP54846 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NrlP54846 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.84■□□□□ 0.77
NrlP54846 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NrlP54846 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NrlP54846 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NrlP54846 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
NrlP54846 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NrlP54846 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
NrlP54846 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.83■□□□□ 0.77
NrlP54846 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NrlP54846 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NrlP54846 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
NrlP54846 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.83■□□□□ 0.77
NrlP54846 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.83■□□□□ 0.77
NrlP54846 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NrlP54846 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NrlP54846 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.83■□□□□ 0.76
NrlP54846 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NrlP54846 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NrlP54846 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NrlP54846 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NrlP54846 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NrlP54846 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.82■□□□□ 0.76
NrlP54846 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NrlP54846 Gm22325-201ENSMUST00000158904 308 ntBASIC19.82■□□□□ 0.76
NrlP54846 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.82■□□□□ 0.76
NrlP54846 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
NrlP54846 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NrlP54846 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
NrlP54846 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NrlP54846 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NrlP54846 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NrlP54846 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NrlP54846 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NrlP54846 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NrlP54846 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NrlP54846 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NrlP54846 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms