Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nid1P10493 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nid1P10493 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Nid1P10493 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.54■□□□□ 0.4
Nid1P10493 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nid1P10493 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.54■□□□□ 0.4
Nid1P10493 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.54■□□□□ 0.4
Nid1P10493 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.54■□□□□ 0.4
Nid1P10493 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nid1P10493 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nid1P10493 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.54■□□□□ 0.4
Nid1P10493 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nid1P10493 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nid1P10493 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nid1P10493 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nid1P10493 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nid1P10493 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.53■□□□□ 0.4
Nid1P10493 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Nid1P10493 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nid1P10493 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.53■□□□□ 0.4
Nid1P10493 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Nid1P10493 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.53■□□□□ 0.4
Nid1P10493 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Nid1P10493 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.53■□□□□ 0.4
Nid1P10493 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.53■□□□□ 0.4
Nid1P10493 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nid1P10493 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nid1P10493 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nid1P10493 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.53■□□□□ 0.4
Nid1P10493 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nid1P10493 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nid1P10493 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nid1P10493 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nid1P10493 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nid1P10493 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nid1P10493 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nid1P10493 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Nid1P10493 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Nid1P10493 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nid1P10493 Gm13146-201ENSMUST00000118508 780 ntBASIC17.52■□□□□ 0.4
Nid1P10493 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nid1P10493 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Nid1P10493 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
Nid1P10493 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.52■□□□□ 0.39
Nid1P10493 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nid1P10493 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.52■□□□□ 0.39
Nid1P10493 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nid1P10493 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.52■□□□□ 0.39
Nid1P10493 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Nid1P10493 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Nid1P10493 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nid1P10493 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nid1P10493 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nid1P10493 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nid1P10493 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nid1P10493 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nid1P10493 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nid1P10493 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.51■□□□□ 0.39
Nid1P10493 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.51■□□□□ 0.39
Nid1P10493 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Nid1P10493 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nid1P10493 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nid1P10493 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nid1P10493 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Nid1P10493 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Nid1P10493 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nid1P10493 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nid1P10493 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nid1P10493 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Nid1P10493 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.5■□□□□ 0.39
Nid1P10493 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nid1P10493 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nid1P10493 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.5■□□□□ 0.39
Nid1P10493 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nid1P10493 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nid1P10493 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nid1P10493 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nid1P10493 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Nid1P10493 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nid1P10493 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nid1P10493 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nid1P10493 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nid1P10493 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nid1P10493 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nid1P10493 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nid1P10493 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nid1P10493 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nid1P10493 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nid1P10493 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.49■□□□□ 0.39
Nid1P10493 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nid1P10493 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nid1P10493 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nid1P10493 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nid1P10493 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nid1P10493 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nid1P10493 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nid1P10493 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nid1P10493 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.48■□□□□ 0.39
Nid1P10493 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Nid1P10493 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms