Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cldn1O88551 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cldn1O88551 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cldn1O88551 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cldn1O88551 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.95■□□□□ 0.14
Cldn1O88551 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cldn1O88551 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cldn1O88551 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Cldn1O88551 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Cldn1O88551 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Cldn1O88551 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Cldn1O88551 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cldn1O88551 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cldn1O88551 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cldn1O88551 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cldn1O88551 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cldn1O88551 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cldn1O88551 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cldn1O88551 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cldn1O88551 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Cldn1O88551 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
Cldn1O88551 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Cldn1O88551 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cldn1O88551 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cldn1O88551 Gm2559-201ENSMUST00000201323 363 ntBASIC15.94■□□□□ 0.14
Cldn1O88551 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.94■□□□□ 0.14
Cldn1O88551 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cldn1O88551 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cldn1O88551 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cldn1O88551 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cldn1O88551 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cldn1O88551 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
Cldn1O88551 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Cldn1O88551 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Cldn1O88551 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cldn1O88551 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cldn1O88551 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.93■□□□□ 0.14
Cldn1O88551 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Cldn1O88551 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.93■□□□□ 0.14
Cldn1O88551 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cldn1O88551 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cldn1O88551 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cldn1O88551 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Cldn1O88551 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cldn1O88551 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cldn1O88551 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cldn1O88551 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cldn1O88551 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cldn1O88551 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Cldn1O88551 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cldn1O88551 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cldn1O88551 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Cldn1O88551 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cldn1O88551 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cldn1O88551 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Cldn1O88551 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cldn1O88551 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cldn1O88551 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Cldn1O88551 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.92■□□□□ 0.14
Cldn1O88551 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cldn1O88551 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cldn1O88551 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cldn1O88551 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cldn1O88551 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cldn1O88551 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cldn1O88551 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cldn1O88551 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Cldn1O88551 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Cldn1O88551 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cldn1O88551 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cldn1O88551 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cldn1O88551 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cldn1O88551 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cldn1O88551 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cldn1O88551 Gm7860-201ENSMUST00000121190 879 ntBASIC15.91■□□□□ 0.14
Cldn1O88551 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cldn1O88551 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Cldn1O88551 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cldn1O88551 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cldn1O88551 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Cldn1O88551 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cldn1O88551 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cldn1O88551 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Cldn1O88551 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.9■□□□□ 0.14
Cldn1O88551 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cldn1O88551 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.9■□□□□ 0.14
Cldn1O88551 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cldn1O88551 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cldn1O88551 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cldn1O88551 AA386476-201ENSMUST00000098781 1665 ntBASIC15.9■□□□□ 0.14
Cldn1O88551 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cldn1O88551 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cldn1O88551 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cldn1O88551 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Cldn1O88551 Gm37055-201ENSMUST00000191866 133 ntBASIC15.9■□□□□ 0.14
Cldn1O88551 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.9■□□□□ 0.14
Cldn1O88551 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cldn1O88551 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.9■□□□□ 0.14
Cldn1O88551 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cldn1O88551 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms