Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRKNO60260 AC003102.1-202ENST00000563394 1796 ntBASIC19.77■□□□□ 0.76
PRKNO60260 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRKNO60260 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRKNO60260 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
PRKNO60260 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRKNO60260 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRKNO60260 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PRKNO60260 FBXW4P1-201ENST00000426721 2239 ntBASIC19.76■□□□□ 0.75
PRKNO60260 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRKNO60260 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRKNO60260 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRKNO60260 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRKNO60260 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRKNO60260 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
PRKNO60260 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.76■□□□□ 0.75
PRKNO60260 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.76■□□□□ 0.75
PRKNO60260 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
PRKNO60260 AC104187.1-201ENST00000607510 612 ntBASIC19.76■□□□□ 0.75
PRKNO60260 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRKNO60260 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRKNO60260 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRKNO60260 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRKNO60260 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRKNO60260 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRKNO60260 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRKNO60260 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PRKNO60260 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRKNO60260 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRKNO60260 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRKNO60260 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.75■□□□□ 0.75
PRKNO60260 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRKNO60260 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PRKNO60260 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.75■□□□□ 0.75
PRKNO60260 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRKNO60260 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.75■□□□□ 0.75
PRKNO60260 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PRKNO60260 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PRKNO60260 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PRKNO60260 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.75■□□□□ 0.75
PRKNO60260 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRKNO60260 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
PRKNO60260 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRKNO60260 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.75■□□□□ 0.75
PRKNO60260 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRKNO60260 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PRKNO60260 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRKNO60260 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRKNO60260 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.74■□□□□ 0.75
PRKNO60260 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.74■□□□□ 0.75
PRKNO60260 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.74■□□□□ 0.75
PRKNO60260 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.74■□□□□ 0.75
PRKNO60260 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.74■□□□□ 0.75
PRKNO60260 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.74■□□□□ 0.75
PRKNO60260 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.74■□□□□ 0.75
PRKNO60260 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PRKNO60260 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PRKNO60260 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.74■□□□□ 0.75
PRKNO60260 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.74■□□□□ 0.75
PRKNO60260 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRKNO60260 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PRKNO60260 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRKNO60260 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRKNO60260 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.73■□□□□ 0.75
PRKNO60260 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.73■□□□□ 0.75
PRKNO60260 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PRKNO60260 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PRKNO60260 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRKNO60260 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
PRKNO60260 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRKNO60260 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRKNO60260 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.72■□□□□ 0.75
PRKNO60260 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRKNO60260 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRKNO60260 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRKNO60260 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.72■□□□□ 0.75
PRKNO60260 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PRKNO60260 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.72■□□□□ 0.75
PRKNO60260 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PRKNO60260 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PRKNO60260 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRKNO60260 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRKNO60260 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRKNO60260 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.71■□□□□ 0.75
PRKNO60260 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRKNO60260 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
PRKNO60260 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
PRKNO60260 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRKNO60260 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRKNO60260 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
PRKNO60260 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.71■□□□□ 0.75
PRKNO60260 KRT19P1-201ENST00000405746 1186 ntBASIC19.71■□□□□ 0.75
PRKNO60260 AC004911.1-201ENST00000416316 871 ntBASIC19.71■□□□□ 0.75
PRKNO60260 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.71■□□□□ 0.75
PRKNO60260 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.71■□□□□ 0.75
PRKNO60260 AC137761.2-201ENST00000561729 223 ntBASIC19.71■□□□□ 0.75
PRKNO60260 AC145350.3-201ENST00000569033 163 ntBASIC19.71■□□□□ 0.75
PRKNO60260 AL137784.2-201ENST00000607332 1000 ntBASIC19.71■□□□□ 0.75
PRKNO60260 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRKNO60260 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms