Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ldb2O55203 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ldb2O55203 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ldb2O55203 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
Ldb2O55203 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ldb2O55203 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ldb2O55203 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ldb2O55203 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ldb2O55203 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ldb2O55203 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ldb2O55203 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ldb2O55203 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ldb2O55203 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.61■□□□□ 0.57
Ldb2O55203 Gm18671-201ENSMUST00000214826 683 ntBASIC18.61■□□□□ 0.57
Ldb2O55203 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ldb2O55203 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ldb2O55203 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.61■□□□□ 0.57
Ldb2O55203 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.61■□□□□ 0.57
Ldb2O55203 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ldb2O55203 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ldb2O55203 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ldb2O55203 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.6■□□□□ 0.57
Ldb2O55203 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ldb2O55203 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ldb2O55203 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.6■□□□□ 0.57
Ldb2O55203 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ldb2O55203 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.6■□□□□ 0.57
Ldb2O55203 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ldb2O55203 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ldb2O55203 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ldb2O55203 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ldb2O55203 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ldb2O55203 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.59■□□□□ 0.57
Ldb2O55203 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.59■□□□□ 0.57
Ldb2O55203 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.59■□□□□ 0.57
Ldb2O55203 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ldb2O55203 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ldb2O55203 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ldb2O55203 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.59■□□□□ 0.57
Ldb2O55203 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ldb2O55203 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.59■□□□□ 0.57
Ldb2O55203 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ldb2O55203 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ldb2O55203 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ldb2O55203 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ldb2O55203 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ldb2O55203 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ldb2O55203 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ldb2O55203 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ldb2O55203 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
Ldb2O55203 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ldb2O55203 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
Ldb2O55203 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ldb2O55203 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.58■□□□□ 0.56
Ldb2O55203 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ldb2O55203 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ldb2O55203 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Ldb2O55203 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ldb2O55203 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ldb2O55203 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ldb2O55203 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ldb2O55203 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ldb2O55203 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ldb2O55203 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ldb2O55203 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ldb2O55203 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ldb2O55203 Gm10849-201ENSMUST00000100397 618 ntBASIC18.57■□□□□ 0.56
Ldb2O55203 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Ldb2O55203 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.57■□□□□ 0.56
Ldb2O55203 Gm26571-201ENSMUST00000181399 666 ntBASIC18.57■□□□□ 0.56
Ldb2O55203 AV356131-201ENSMUST00000206201 750 ntBASIC18.57■□□□□ 0.56
Ldb2O55203 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ldb2O55203 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ldb2O55203 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ldb2O55203 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ldb2O55203 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.57■□□□□ 0.56
Ldb2O55203 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ldb2O55203 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ldb2O55203 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ldb2O55203 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ldb2O55203 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ldb2O55203 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ldb2O55203 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ldb2O55203 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ldb2O55203 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ldb2O55203 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ldb2O55203 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ldb2O55203 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ldb2O55203 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ldb2O55203 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ldb2O55203 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ldb2O55203 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.56■□□□□ 0.56
Ldb2O55203 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ldb2O55203 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ldb2O55203 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ldb2O55203 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ldb2O55203 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ldb2O55203 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.55■□□□□ 0.56
Ldb2O55203 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.55■□□□□ 0.56
Ldb2O55203 Gm7514-201ENSMUST00000209475 934 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms