Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Efnb3O35393 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Efnb3O35393 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.74□□□□□ -0.05
Efnb3O35393 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Efnb3O35393 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Efnb3O35393 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Efnb3O35393 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Efnb3O35393 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.73□□□□□ -0.05
Efnb3O35393 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Efnb3O35393 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Efnb3O35393 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Efnb3O35393 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.73□□□□□ -0.05
Efnb3O35393 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Efnb3O35393 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Efnb3O35393 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Efnb3O35393 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Efnb3O35393 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Efnb3O35393 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Efnb3O35393 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Efnb3O35393 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Efnb3O35393 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Efnb3O35393 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Efnb3O35393 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Efnb3O35393 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Efnb3O35393 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Efnb3O35393 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Efnb3O35393 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Efnb3O35393 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Efnb3O35393 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Efnb3O35393 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Efnb3O35393 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Efnb3O35393 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Efnb3O35393 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Efnb3O35393 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Efnb3O35393 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Efnb3O35393 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Efnb3O35393 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.72□□□□□ -0.05
Efnb3O35393 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Efnb3O35393 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Efnb3O35393 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Efnb3O35393 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Efnb3O35393 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Efnb3O35393 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.71□□□□□ -0.05
Efnb3O35393 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Efnb3O35393 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Efnb3O35393 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Efnb3O35393 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Efnb3O35393 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.71□□□□□ -0.05
Efnb3O35393 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.71□□□□□ -0.05
Efnb3O35393 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Efnb3O35393 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.71□□□□□ -0.05
Efnb3O35393 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Efnb3O35393 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
Efnb3O35393 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Efnb3O35393 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Efnb3O35393 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Efnb3O35393 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Efnb3O35393 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.71□□□□□ -0.06
Efnb3O35393 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Efnb3O35393 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Efnb3O35393 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Efnb3O35393 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.7□□□□□ -0.06
Efnb3O35393 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Efnb3O35393 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Efnb3O35393 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Efnb3O35393 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Efnb3O35393 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Efnb3O35393 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Efnb3O35393 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Efnb3O35393 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Efnb3O35393 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Efnb3O35393 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Efnb3O35393 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Efnb3O35393 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Efnb3O35393 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.7□□□□□ -0.06
Efnb3O35393 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.7□□□□□ -0.06
Efnb3O35393 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Efnb3O35393 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Efnb3O35393 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Efnb3O35393 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.7□□□□□ -0.06
Efnb3O35393 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Efnb3O35393 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Efnb3O35393 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Efnb3O35393 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Efnb3O35393 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Efnb3O35393 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Efnb3O35393 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Efnb3O35393 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Efnb3O35393 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Efnb3O35393 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Efnb3O35393 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Efnb3O35393 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Efnb3O35393 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Efnb3O35393 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Efnb3O35393 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.69□□□□□ -0.06
Efnb3O35393 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Efnb3O35393 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.69□□□□□ -0.06
Efnb3O35393 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Efnb3O35393 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Efnb3O35393 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms