Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.55■□□□□ 0.08
Lnp1A0A1B0GSK3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.55■□□□□ 0.08
Lnp1A0A1B0GSK3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.55■□□□□ 0.08
Lnp1A0A1B0GSK3 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.55■□□□□ 0.08
Lnp1A0A1B0GSK3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lnp1A0A1B0GSK3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lnp1A0A1B0GSK3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lnp1A0A1B0GSK3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lnp1A0A1B0GSK3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Lnp1A0A1B0GSK3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lnp1A0A1B0GSK3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lnp1A0A1B0GSK3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Lnp1A0A1B0GSK3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Lnp1A0A1B0GSK3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lnp1A0A1B0GSK3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lnp1A0A1B0GSK3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lnp1A0A1B0GSK3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.54■□□□□ 0.08
Lnp1A0A1B0GSK3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.54■□□□□ 0.08
Lnp1A0A1B0GSK3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lnp1A0A1B0GSK3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lnp1A0A1B0GSK3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Lnp1A0A1B0GSK3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lnp1A0A1B0GSK3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lnp1A0A1B0GSK3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lnp1A0A1B0GSK3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lnp1A0A1B0GSK3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lnp1A0A1B0GSK3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lnp1A0A1B0GSK3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lnp1A0A1B0GSK3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lnp1A0A1B0GSK3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lnp1A0A1B0GSK3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lnp1A0A1B0GSK3 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.53■□□□□ 0.08
Lnp1A0A1B0GSK3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lnp1A0A1B0GSK3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Lnp1A0A1B0GSK3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.53■□□□□ 0.08
Lnp1A0A1B0GSK3 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.53■□□□□ 0.08
Lnp1A0A1B0GSK3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lnp1A0A1B0GSK3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Lnp1A0A1B0GSK3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lnp1A0A1B0GSK3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lnp1A0A1B0GSK3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lnp1A0A1B0GSK3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lnp1A0A1B0GSK3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Lnp1A0A1B0GSK3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lnp1A0A1B0GSK3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lnp1A0A1B0GSK3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Lnp1A0A1B0GSK3 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.52■□□□□ 0.08
Lnp1A0A1B0GSK3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lnp1A0A1B0GSK3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lnp1A0A1B0GSK3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lnp1A0A1B0GSK3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lnp1A0A1B0GSK3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lnp1A0A1B0GSK3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Lnp1A0A1B0GSK3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lnp1A0A1B0GSK3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Lnp1A0A1B0GSK3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Lnp1A0A1B0GSK3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lnp1A0A1B0GSK3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Lnp1A0A1B0GSK3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lnp1A0A1B0GSK3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.52■□□□□ 0.08
Lnp1A0A1B0GSK3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.52■□□□□ 0.08
Lnp1A0A1B0GSK3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lnp1A0A1B0GSK3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lnp1A0A1B0GSK3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Lnp1A0A1B0GSK3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
Lnp1A0A1B0GSK3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Lnp1A0A1B0GSK3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lnp1A0A1B0GSK3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lnp1A0A1B0GSK3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lnp1A0A1B0GSK3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lnp1A0A1B0GSK3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Lnp1A0A1B0GSK3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Lnp1A0A1B0GSK3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lnp1A0A1B0GSK3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Lnp1A0A1B0GSK3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lnp1A0A1B0GSK3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Lnp1A0A1B0GSK3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Lnp1A0A1B0GSK3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lnp1A0A1B0GSK3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lnp1A0A1B0GSK3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lnp1A0A1B0GSK3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.51■□□□□ 0.07
Lnp1A0A1B0GSK3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lnp1A0A1B0GSK3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lnp1A0A1B0GSK3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lnp1A0A1B0GSK3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lnp1A0A1B0GSK3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lnp1A0A1B0GSK3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Lnp1A0A1B0GSK3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lnp1A0A1B0GSK3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lnp1A0A1B0GSK3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lnp1A0A1B0GSK3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.5■□□□□ 0.07
Lnp1A0A1B0GSK3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.5■□□□□ 0.07
Lnp1A0A1B0GSK3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lnp1A0A1B0GSK3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lnp1A0A1B0GSK3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Lnp1A0A1B0GSK3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Lnp1A0A1B0GSK3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Lnp1A0A1B0GSK3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Lnp1A0A1B0GSK3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.5■□□□□ 0.07
Lnp1A0A1B0GSK3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms