Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 AC154266.1-201ENSMUST00000223190 503 ntBASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Igkv3-5A0A140T8M6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Igkv3-5A0A140T8M6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Igkv3-5A0A140T8M6 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC11.77□□□□□ -0.52
Igkv3-5A0A140T8M6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv3-5A0A140T8M6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv3-5A0A140T8M6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv3-5A0A140T8M6 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv3-5A0A140T8M6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC11.77□□□□□ -0.53
Igkv3-5A0A140T8M6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv3-5A0A140T8M6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv3-5A0A140T8M6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC11.77□□□□□ -0.53
Igkv3-5A0A140T8M6 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv3-5A0A140T8M6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv3-5A0A140T8M6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv3-5A0A140T8M6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv3-5A0A140T8M6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv3-5A0A140T8M6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv3-5A0A140T8M6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv3-5A0A140T8M6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv3-5A0A140T8M6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv3-5A0A140T8M6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv3-5A0A140T8M6 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Igkv3-5A0A140T8M6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Igkv3-5A0A140T8M6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv3-5A0A140T8M6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv3-5A0A140T8M6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv3-5A0A140T8M6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv3-5A0A140T8M6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv3-5A0A140T8M6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv3-5A0A140T8M6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv3-5A0A140T8M6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Igkv3-5A0A140T8M6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Igkv3-5A0A140T8M6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv3-5A0A140T8M6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv3-5A0A140T8M6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Igkv3-5A0A140T8M6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC11.76□□□□□ -0.53
Igkv3-5A0A140T8M6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv3-5A0A140T8M6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv3-5A0A140T8M6 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.76□□□□□ -0.53
Igkv3-5A0A140T8M6 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Igkv3-5A0A140T8M6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igkv3-5A0A140T8M6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Igkv3-5A0A140T8M6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Igkv3-5A0A140T8M6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv3-5A0A140T8M6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv3-5A0A140T8M6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv3-5A0A140T8M6 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv3-5A0A140T8M6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv3-5A0A140T8M6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv3-5A0A140T8M6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv3-5A0A140T8M6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC11.75□□□□□ -0.53
Igkv3-5A0A140T8M6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC11.75□□□□□ -0.53
Igkv3-5A0A140T8M6 Gm5576-201ENSMUST00000075809 1236 ntBASIC11.75□□□□□ -0.53
Igkv3-5A0A140T8M6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv3-5A0A140T8M6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv3-5A0A140T8M6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv3-5A0A140T8M6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv3-5A0A140T8M6 Gm20100-201ENSMUST00000209418 2272 ntBASIC11.75□□□□□ -0.53
Igkv3-5A0A140T8M6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv3-5A0A140T8M6 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igkv3-5A0A140T8M6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC11.74□□□□□ -0.53
Igkv3-5A0A140T8M6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv3-5A0A140T8M6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Igkv3-5A0A140T8M6 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv3-5A0A140T8M6 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv3-5A0A140T8M6 Gm12922-201ENSMUST00000120626 809 ntBASIC11.74□□□□□ -0.53
Igkv3-5A0A140T8M6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC11.74□□□□□ -0.53
Igkv3-5A0A140T8M6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv3-5A0A140T8M6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC11.74□□□□□ -0.53
Igkv3-5A0A140T8M6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC11.74□□□□□ -0.53
Igkv3-5A0A140T8M6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv3-5A0A140T8M6 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv3-5A0A140T8M6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv3-5A0A140T8M6 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv3-5A0A140T8M6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv3-5A0A140T8M6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igkv3-5A0A140T8M6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv3-5A0A140T8M6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms