Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC13.59□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Trav9n-2A0A0G2JDP3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9n-2A0A0G2JDP3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav9n-2A0A0G2JDP3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav9n-2A0A0G2JDP3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Gm9988-201ENSMUST00000069786 435 ntBASIC13.56□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.56□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13.56□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9n-2A0A0G2JDP3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.55□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Gm38205-201ENSMUST00000192243 258 ntBASIC13.55□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9n-2A0A0G2JDP3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9n-2A0A0G2JDP3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms