Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 Gm13146-201ENSMUST00000118508 780 ntBASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 AV356131-201ENSMUST00000206201 750 ntBASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv30A0A0B4J1P1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv30A0A0B4J1P1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv30A0A0B4J1P1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv30A0A0B4J1P1 Gm42569-201ENSMUST00000200539 472 ntBASIC14.06□□□□□ -0.16
Trbv30A0A0B4J1P1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trbv30A0A0B4J1P1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv30A0A0B4J1P1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv30A0A0B4J1P1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv30A0A0B4J1P1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.06□□□□□ -0.16
Trbv30A0A0B4J1P1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv30A0A0B4J1P1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv30A0A0B4J1P1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv30A0A0B4J1P1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trbv30A0A0B4J1P1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv30A0A0B4J1P1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv30A0A0B4J1P1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.05□□□□□ -0.16
Trbv30A0A0B4J1P1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trbv30A0A0B4J1P1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.05□□□□□ -0.16
Trbv30A0A0B4J1P1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv30A0A0B4J1P1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv30A0A0B4J1P1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trbv30A0A0B4J1P1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv30A0A0B4J1P1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv30A0A0B4J1P1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv30A0A0B4J1P1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv30A0A0B4J1P1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv30A0A0B4J1P1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv30A0A0B4J1P1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trbv30A0A0B4J1P1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.04□□□□□ -0.16
Trbv30A0A0B4J1P1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv30A0A0B4J1P1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv30A0A0B4J1P1 Gm7514-201ENSMUST00000209475 934 ntBASIC14.04□□□□□ -0.16
Trbv30A0A0B4J1P1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv30A0A0B4J1P1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv30A0A0B4J1P1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv30A0A0B4J1P1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv30A0A0B4J1P1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv30A0A0B4J1P1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.04□□□□□ -0.16
Trbv30A0A0B4J1P1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv30A0A0B4J1P1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv30A0A0B4J1P1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv30A0A0B4J1P1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv30A0A0B4J1P1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv30A0A0B4J1P1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv30A0A0B4J1P1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv30A0A0B4J1P1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv30A0A0B4J1P1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv30A0A0B4J1P1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv30A0A0B4J1P1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv30A0A0B4J1P1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv30A0A0B4J1P1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv30A0A0B4J1P1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv30A0A0B4J1P1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv30A0A0B4J1P1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.03□□□□□ -0.16
Trbv30A0A0B4J1P1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv30A0A0B4J1P1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv30A0A0B4J1P1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv30A0A0B4J1P1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trbv30A0A0B4J1P1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv30A0A0B4J1P1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv30A0A0B4J1P1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv30A0A0B4J1P1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Trbv30A0A0B4J1P1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv30A0A0B4J1P1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv30A0A0B4J1P1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv30A0A0B4J1P1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv30A0A0B4J1P1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv30A0A0B4J1P1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv30A0A0B4J1P1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv30A0A0B4J1P1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv30A0A0B4J1P1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trbv30A0A0B4J1P1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv30A0A0B4J1P1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv30A0A0B4J1P1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trbv30A0A0B4J1P1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv30A0A0B4J1P1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv30A0A0B4J1P1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv30A0A0B4J1P1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trbv30A0A0B4J1P1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv30A0A0B4J1P1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv30A0A0B4J1P1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Trbv30A0A0B4J1P1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv30A0A0B4J1P1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms