Protein–RNA interactions for Protein: A0A0B4J1J5

Ighv9-3, Immunoglobulin heavy variable V9-3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-3A0A0B4J1J5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.5■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.5■□□□□ 0.07
Ighv9-3A0A0B4J1J5 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Gm29257-201ENSMUST00000186115 639 ntBASIC15.5■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ighv9-3A0A0B4J1J5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv9-3A0A0B4J1J5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.5■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Gm12933-201ENSMUST00000120203 872 ntBASIC15.49■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.49■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.49■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Gm10602-201ENSMUST00000098239 609 ntBASIC15.49■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv9-3A0A0B4J1J5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.47■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.47■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.47■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Gm6365-201ENSMUST00000054711 744 ntBASIC15.47■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv9-3A0A0B4J1J5 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.47■□□□□ 0.07
Ighv9-3A0A0B4J1J5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.47■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.46■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.46■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv9-3A0A0B4J1J5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Mir5133-201ENSMUST00000174955 77 ntBASIC15.46■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Ighv9-3A0A0B4J1J5 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Ighv9-3A0A0B4J1J5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.46■□□□□ 0.06
Ighv9-3A0A0B4J1J5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Ighv9-3A0A0B4J1J5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Ighv9-3A0A0B4J1J5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv9-3A0A0B4J1J5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.45■□□□□ 0.06
Ighv9-3A0A0B4J1J5 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv9-3A0A0B4J1J5 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv9-3A0A0B4J1J5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv9-3A0A0B4J1J5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms