Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-5A0A075B6B9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-5A0A075B6B9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-5A0A075B6B9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav6d-5A0A075B6B9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav6d-5A0A075B6B9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Trav6d-5A0A075B6B9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-5A0A075B6B9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-5A0A075B6B9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-5A0A075B6B9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-5A0A075B6B9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Trav6d-5A0A075B6B9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Trav6d-5A0A075B6B9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav6d-5A0A075B6B9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Trav6d-5A0A075B6B9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav6d-5A0A075B6B9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6d-5A0A075B6B9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6d-5A0A075B6B9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.08■□□□□ 0
Trav6d-5A0A075B6B9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav6d-5A0A075B6B9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav6d-5A0A075B6B9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6d-5A0A075B6B9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav6d-5A0A075B6B9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.08■□□□□ 0
Trav6d-5A0A075B6B9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav6d-5A0A075B6B9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6d-5A0A075B6B9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6d-5A0A075B6B9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav6d-5A0A075B6B9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-5A0A075B6B9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-5A0A075B6B9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-5A0A075B6B9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-5A0A075B6B9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-5A0A075B6B9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC15.07■□□□□ 0
Trav6d-5A0A075B6B9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-5A0A075B6B9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-5A0A075B6B9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
Trav6d-5A0A075B6B9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trav6d-5A0A075B6B9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-5A0A075B6B9 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.06■□□□□ 0
Trav6d-5A0A075B6B9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-5A0A075B6B9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-5A0A075B6B9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav6d-5A0A075B6B9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-5A0A075B6B9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.06■□□□□ 0
Trav6d-5A0A075B6B9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
Trav6d-5A0A075B6B9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.06■□□□□ 0
Trav6d-5A0A075B6B9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.06■□□□□ 0
Trav6d-5A0A075B6B9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-5A0A075B6B9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-5A0A075B6B9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-5A0A075B6B9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav6d-5A0A075B6B9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav6d-5A0A075B6B9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-5A0A075B6B9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-5A0A075B6B9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-5A0A075B6B9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-5A0A075B6B9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav6d-5A0A075B6B9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-5A0A075B6B9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6d-5A0A075B6B9 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.05■□□□□ -0
Trav6d-5A0A075B6B9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6d-5A0A075B6B9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6d-5A0A075B6B9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6d-5A0A075B6B9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6d-5A0A075B6B9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Trav6d-5A0A075B6B9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trav6d-5A0A075B6B9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6d-5A0A075B6B9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Trav6d-5A0A075B6B9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav6d-5A0A075B6B9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-5A0A075B6B9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.04■□□□□ -0
Trav6d-5A0A075B6B9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Trav6d-5A0A075B6B9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-5A0A075B6B9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-5A0A075B6B9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.04■□□□□ -0
Trav6d-5A0A075B6B9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav6d-5A0A075B6B9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-5A0A075B6B9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-5A0A075B6B9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.04■□□□□ -0
Trav6d-5A0A075B6B9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-5A0A075B6B9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-5A0A075B6B9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav6d-5A0A075B6B9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.04■□□□□ -0
Trav6d-5A0A075B6B9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-5A0A075B6B9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-5A0A075B6B9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-5A0A075B6B9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav6d-5A0A075B6B9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.03■□□□□ -0
Trav6d-5A0A075B6B9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-5A0A075B6B9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-5A0A075B6B9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-5A0A075B6B9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-5A0A075B6B9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-5A0A075B6B9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-5A0A075B6B9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-5A0A075B6B9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
Trav6d-5A0A075B6B9 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.03■□□□□ -0
Trav6d-5A0A075B6B9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-5A0A075B6B9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-5A0A075B6B9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms