Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3-4A0A075B654 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav3-4A0A075B654 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3-4A0A075B654 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3-4A0A075B654 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3-4A0A075B654 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav3-4A0A075B654 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav3-4A0A075B654 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3-4A0A075B654 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3-4A0A075B654 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3-4A0A075B654 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav3-4A0A075B654 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3-4A0A075B654 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3-4A0A075B654 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Trav3-4A0A075B654 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3-4A0A075B654 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3-4A0A075B654 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3-4A0A075B654 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav3-4A0A075B654 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav3-4A0A075B654 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-4A0A075B654 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-4A0A075B654 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-4A0A075B654 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav3-4A0A075B654 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-4A0A075B654 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-4A0A075B654 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trav3-4A0A075B654 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-4A0A075B654 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav3-4A0A075B654 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-4A0A075B654 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-4A0A075B654 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-4A0A075B654 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-4A0A075B654 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav3-4A0A075B654 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav3-4A0A075B654 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav3-4A0A075B654 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3-4A0A075B654 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-4A0A075B654 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-4A0A075B654 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-4A0A075B654 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-4A0A075B654 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-4A0A075B654 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-4A0A075B654 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-4A0A075B654 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-4A0A075B654 Gm11847-201ENSMUST00000125165 1119 ntBASIC12.58□□□□□ -0.4
Trav3-4A0A075B654 BC021767-201ENSMUST00000126387 1716 ntBASIC12.58□□□□□ -0.4
Trav3-4A0A075B654 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-4A0A075B654 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-4A0A075B654 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Trav3-4A0A075B654 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav3-4A0A075B654 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-4A0A075B654 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav3-4A0A075B654 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav3-4A0A075B654 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3-4A0A075B654 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-4A0A075B654 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Trav3-4A0A075B654 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-4A0A075B654 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-4A0A075B654 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-4A0A075B654 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-4A0A075B654 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav3-4A0A075B654 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-4A0A075B654 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav3-4A0A075B654 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-4A0A075B654 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-4A0A075B654 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-4A0A075B654 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-4A0A075B654 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-4A0A075B654 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-4A0A075B654 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-4A0A075B654 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-4A0A075B654 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3-4A0A075B654 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-4A0A075B654 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-4A0A075B654 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav3-4A0A075B654 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-4A0A075B654 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav3-4A0A075B654 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-4A0A075B654 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-4A0A075B654 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-4A0A075B654 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-4A0A075B654 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-4A0A075B654 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-4A0A075B654 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav3-4A0A075B654 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-4A0A075B654 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-4A0A075B654 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-4A0A075B654 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-4A0A075B654 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-4A0A075B654 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav3-4A0A075B654 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-4A0A075B654 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-4A0A075B654 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-4A0A075B654 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav3-4A0A075B654 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3-4A0A075B654 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-4A0A075B654 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-4A0A075B654 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trav3-4A0A075B654 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3-4A0A075B654 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms