Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ighv1-55A0A075B5W6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ighv1-55A0A075B5W6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ighv1-55A0A075B5W6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ighv1-55A0A075B5W6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ighv1-55A0A075B5W6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ighv1-55A0A075B5W6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.76□□□□□ -0.05
Ighv1-55A0A075B5W6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ighv1-55A0A075B5W6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.76□□□□□ -0.05
Ighv1-55A0A075B5W6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ighv1-55A0A075B5W6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Ighv1-55A0A075B5W6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ighv1-55A0A075B5W6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.76□□□□□ -0.05
Ighv1-55A0A075B5W6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ighv1-55A0A075B5W6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ighv1-55A0A075B5W6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.76□□□□□ -0.05
Ighv1-55A0A075B5W6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ighv1-55A0A075B5W6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ighv1-55A0A075B5W6 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ighv1-55A0A075B5W6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ighv1-55A0A075B5W6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Ighv1-55A0A075B5W6 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ighv1-55A0A075B5W6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ighv1-55A0A075B5W6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.75□□□□□ -0.05
Ighv1-55A0A075B5W6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ighv1-55A0A075B5W6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.75□□□□□ -0.05
Ighv1-55A0A075B5W6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ighv1-55A0A075B5W6 Gm13534-201ENSMUST00000121169 513 ntBASIC14.75□□□□□ -0.05
Ighv1-55A0A075B5W6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ighv1-55A0A075B5W6 Gm18284-201ENSMUST00000172604 624 ntBASIC14.75□□□□□ -0.05
Ighv1-55A0A075B5W6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.75□□□□□ -0.05
Ighv1-55A0A075B5W6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.75□□□□□ -0.05
Ighv1-55A0A075B5W6 Gm42642-201ENSMUST00000200683 355 ntBASIC14.75□□□□□ -0.05
Ighv1-55A0A075B5W6 Gm18671-201ENSMUST00000214826 683 ntBASIC14.75□□□□□ -0.05
Ighv1-55A0A075B5W6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ighv1-55A0A075B5W6 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.75□□□□□ -0.05
Ighv1-55A0A075B5W6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ighv1-55A0A075B5W6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ighv1-55A0A075B5W6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ighv1-55A0A075B5W6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Gm10033-202ENSMUST00000211874 928 ntBASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ighv1-55A0A075B5W6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ighv1-55A0A075B5W6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ighv1-55A0A075B5W6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ighv1-55A0A075B5W6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ighv1-55A0A075B5W6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ighv1-55A0A075B5W6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.73□□□□□ -0.05
Ighv1-55A0A075B5W6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.73□□□□□ -0.05
Ighv1-55A0A075B5W6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.73□□□□□ -0.05
Ighv1-55A0A075B5W6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ighv1-55A0A075B5W6 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.73□□□□□ -0.05
Ighv1-55A0A075B5W6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ighv1-55A0A075B5W6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.73□□□□□ -0.05
Ighv1-55A0A075B5W6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ighv1-55A0A075B5W6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ighv1-55A0A075B5W6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.73□□□□□ -0.05
Ighv1-55A0A075B5W6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ighv1-55A0A075B5W6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ighv1-55A0A075B5W6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ighv1-55A0A075B5W6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ighv1-55A0A075B5W6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ighv1-55A0A075B5W6 Gm15039-201ENSMUST00000118914 875 ntBASIC14.72□□□□□ -0.05
Ighv1-55A0A075B5W6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.72□□□□□ -0.05
Ighv1-55A0A075B5W6 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.72□□□□□ -0.05
Ighv1-55A0A075B5W6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ighv1-55A0A075B5W6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.72□□□□□ -0.05
Ighv1-55A0A075B5W6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ighv1-55A0A075B5W6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ighv1-55A0A075B5W6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ighv1-55A0A075B5W6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ighv1-55A0A075B5W6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ighv1-55A0A075B5W6 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms