Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Nedd1-201ENSMUST00000020163 3534 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b2Q3UJB0 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b2Q3UJB0 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b2Q3UJB0 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b2Q3UJB0 Prr14-202ENSMUST00000106292 2175 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sf3b2Q3UJB0 Gm43764-201ENSMUST00000202553 3172 ntBASIC10.56□□□□□ -0.72
Sf3b2Q3UJB0 Gm16536-201ENSMUST00000162209 1589 ntBASIC10.56□□□□□ -0.72
Sf3b2Q3UJB0 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sf3b2Q3UJB0 Khdc1a-201ENSMUST00000088407 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sf3b2Q3UJB0 Med12-202ENSMUST00000087956 6746 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Cpeb1os1-201ENSMUST00000207156 2112 ntBASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Brcc3-201ENSMUST00000033544 4310 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Cflar-201ENSMUST00000069333 3163 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Gm10482-202ENSMUST00000189825 2287 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Ebpl-201ENSMUST00000022494 10092 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Zfp40-201ENSMUST00000037057 4103 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Nrxn3-205ENSMUST00000163134 7922 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Plagl2-202ENSMUST00000109795 5571 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Gm44986-201ENSMUST00000206292 2829 ntBASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 AC156802.2-201ENSMUST00000225239 5740 ntBASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 I830077J02Rik-201ENSMUST00000098758 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Gm45797-201ENSMUST00000212759 1921 ntBASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Limk2-203ENSMUST00000101642 3693 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Gm43750-201ENSMUST00000199027 2493 ntBASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Gm7821-201ENSMUST00000117111 788 ntBASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Gm8550-201ENSMUST00000161621 653 ntBASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Ly6a-202ENSMUST00000186526 862 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Gm17833-201ENSMUST00000197629 1065 ntBASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 AC125539.1-201ENSMUST00000227423 622 ntBASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Mir7b-201ENSMUST00000083557 111 ntBASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Ndst3-206ENSMUST00000154668 5570 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Rab27a-203ENSMUST00000184146 3168 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Uggt1-201ENSMUST00000046875 9033 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Sox5-205ENSMUST00000111749 3879 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Gm36952-201ENSMUST00000194923 3625 ntBASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Gm43158-201ENSMUST00000198484 1555 ntBASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Cabyr-206ENSMUST00000186263 2125 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Pcdhga1-202ENSMUST00000194888 3247 ntAPPRIS ALT2 BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Golga1-201ENSMUST00000039165 4869 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Cphx2-201ENSMUST00000168149 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Cphx3-202ENSMUST00000184577 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Pde1c-204ENSMUST00000164752 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Stx8-203ENSMUST00000108675 1497 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Ndst3-207ENSMUST00000172537 3152 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sf3b2Q3UJB0 Lrrc55-202ENSMUST00000111601 2900 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Synj2-209ENSMUST00000115790 4808 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Ndst2-201ENSMUST00000047490 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Cdh23-205ENSMUST00000105464 11090 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Gm14904-201ENSMUST00000117067 335 ntBASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Gm15066-201ENSMUST00000120163 2608 ntBASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Gm14186-201ENSMUST00000120804 137 ntBASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Fam229b-203ENSMUST00000125042 707 ntTSL 5 BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Fam229b-206ENSMUST00000136546 592 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Gm7991-201ENSMUST00000168668 591 ntBASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Gm6536-201ENSMUST00000171180 615 ntBASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Eci2-213ENSMUST00000178421 1414 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Clasp1-205ENSMUST00000185405 4597 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Gm8479-201ENSMUST00000203825 718 ntBASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 AC122539.1-201ENSMUST00000219925 329 ntBASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 AC116596.2-203ENSMUST00000227345 731 ntBASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Ocm-202ENSMUST00000085704 330 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Fam198b-201ENSMUST00000029567 6627 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Fancb-203ENSMUST00000167446 2953 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Nron-203ENSMUST00000156297 3340 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Dhcr7-202ENSMUST00000124340 2556 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Gprasp2-211ENSMUST00000173804 3814 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Acot12-201ENSMUST00000022120 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 AC160637.1-201ENSMUST00000214037 3887 ntBASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Gm17359-203ENSMUST00000199658 1819 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Dcaf11-201ENSMUST00000072530 2601 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sf3b2Q3UJB0 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Nucb1-210ENSMUST00000211765 4853 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Col10a1-201ENSMUST00000105511 3130 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Lpl-201ENSMUST00000015712 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms