Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Gm15039-201ENSMUST00000118914 875 ntBASIC19.19■□□□□ 0.66
Gm5538W4VSP6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm5538W4VSP6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm5538W4VSP6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm5538W4VSP6 Gm42642-201ENSMUST00000200683 355 ntBASIC19.19■□□□□ 0.66
Gm5538W4VSP6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm5538W4VSP6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm5538W4VSP6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm5538W4VSP6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Gm5538W4VSP6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm5538W4VSP6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm5538W4VSP6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm5538W4VSP6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm5538W4VSP6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm5538W4VSP6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.18■□□□□ 0.66
Gm5538W4VSP6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.18■□□□□ 0.66
Gm5538W4VSP6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm5538W4VSP6 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.18■□□□□ 0.66
Gm5538W4VSP6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm5538W4VSP6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm5538W4VSP6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm5538W4VSP6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm5538W4VSP6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm5538W4VSP6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.18■□□□□ 0.66
Gm5538W4VSP6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm5538W4VSP6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm5538W4VSP6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm5538W4VSP6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.17■□□□□ 0.66
Gm5538W4VSP6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm5538W4VSP6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm5538W4VSP6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm5538W4VSP6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.17■□□□□ 0.66
Gm5538W4VSP6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
Gm5538W4VSP6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm5538W4VSP6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm5538W4VSP6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Gm5538W4VSP6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm5538W4VSP6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm5538W4VSP6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm5538W4VSP6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.16■□□□□ 0.66
Gm5538W4VSP6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm5538W4VSP6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm5538W4VSP6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm5538W4VSP6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.16■□□□□ 0.66
Gm5538W4VSP6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.16■□□□□ 0.66
Gm5538W4VSP6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Gm5538W4VSP6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm5538W4VSP6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm5538W4VSP6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm5538W4VSP6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Gm5538W4VSP6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Gm5538W4VSP6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm5538W4VSP6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm5538W4VSP6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.16■□□□□ 0.66
Gm5538W4VSP6 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.16■□□□□ 0.66
Gm5538W4VSP6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Gm5538W4VSP6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.15■□□□□ 0.66
Gm5538W4VSP6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5538W4VSP6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.15■□□□□ 0.66
Gm5538W4VSP6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.15■□□□□ 0.66
Gm5538W4VSP6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5538W4VSP6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5538W4VSP6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5538W4VSP6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5538W4VSP6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm5538W4VSP6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gm5538W4VSP6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gm5538W4VSP6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Gm5538W4VSP6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm5538W4VSP6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm5538W4VSP6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Gm5538W4VSP6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.14■□□□□ 0.65
Gm5538W4VSP6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gm5538W4VSP6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm5538W4VSP6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gm5538W4VSP6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm5538W4VSP6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm5538W4VSP6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm5538W4VSP6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm5538W4VSP6 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm5538W4VSP6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.14■□□□□ 0.65
Gm5538W4VSP6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm5538W4VSP6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm5538W4VSP6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm5538W4VSP6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm5538W4VSP6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.13■□□□□ 0.65
Gm5538W4VSP6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Gm5538W4VSP6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm5538W4VSP6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm5538W4VSP6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm5538W4VSP6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.13■□□□□ 0.65
Gm5538W4VSP6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm5538W4VSP6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm5538W4VSP6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Gm5538W4VSP6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm5538W4VSP6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm5538W4VSP6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Gm5538W4VSP6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm5538W4VSP6 Gm10849-201ENSMUST00000100397 618 ntBASIC19.12■□□□□ 0.65
Gm5538W4VSP6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms