Protein–RNA interactions for Protein: Q9H0K4

RSPH6A, Radial spoke head protein 6 homolog A, humanhuman

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH6AQ9H0K4 AP001160.3-201ENST00000601484 763 ntBASIC28.24■■■□□ 2.11
RSPH6AQ9H0K4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC28.24■■■□□ 2.11
RSPH6AQ9H0K4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
RSPH6AQ9H0K4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RSPH6AQ9H0K4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RSPH6AQ9H0K4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RSPH6AQ9H0K4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
RSPH6AQ9H0K4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RSPH6AQ9H0K4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
RSPH6AQ9H0K4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC28.23■■■□□ 2.11
RSPH6AQ9H0K4 AC010141.2-201ENST00000452426 721 ntBASIC28.23■■■□□ 2.11
RSPH6AQ9H0K4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC28.23■■■□□ 2.11
RSPH6AQ9H0K4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC28.23■■■□□ 2.11
RSPH6AQ9H0K4 RAP2CP1-201ENST00000605103 478 ntBASIC28.23■■■□□ 2.11
RSPH6AQ9H0K4 AC003102.1-202ENST00000563394 1796 ntBASIC28.23■■■□□ 2.11
RSPH6AQ9H0K4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
RSPH6AQ9H0K4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
RSPH6AQ9H0K4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC28.23■■■□□ 2.11
RSPH6AQ9H0K4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
RSPH6AQ9H0K4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC28.22■■■□□ 2.11
RSPH6AQ9H0K4 GUSBP5-202ENST00000510805 1989 ntBASIC28.22■■■□□ 2.11
RSPH6AQ9H0K4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC28.22■■■□□ 2.11
RSPH6AQ9H0K4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
RSPH6AQ9H0K4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC28.22■■■□□ 2.11
RSPH6AQ9H0K4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RSPH6AQ9H0K4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
RSPH6AQ9H0K4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
RSPH6AQ9H0K4 AC053503.5-201ENST00000601508 636 ntBASIC28.22■■■□□ 2.11
RSPH6AQ9H0K4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RSPH6AQ9H0K4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RSPH6AQ9H0K4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC28.22■■■□□ 2.11
RSPH6AQ9H0K4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC28.22■■■□□ 2.11
RSPH6AQ9H0K4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
RSPH6AQ9H0K4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RSPH6AQ9H0K4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
RSPH6AQ9H0K4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RSPH6AQ9H0K4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC28.21■■■□□ 2.11
RSPH6AQ9H0K4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RSPH6AQ9H0K4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC28.21■■■□□ 2.11
RSPH6AQ9H0K4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
RSPH6AQ9H0K4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
RSPH6AQ9H0K4 AC242852.2-201ENST00000615738 1807 ntBASIC28.2■■■□□ 2.11
RSPH6AQ9H0K4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
RSPH6AQ9H0K4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC28.2■■■□□ 2.1
RSPH6AQ9H0K4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
RSPH6AQ9H0K4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC28.2■■■□□ 2.1
RSPH6AQ9H0K4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC28.2■■■□□ 2.1
RSPH6AQ9H0K4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC28.2■■■□□ 2.1
RSPH6AQ9H0K4 UBE2DNL-204ENST00000602536 740 ntBASIC28.2■■■□□ 2.1
RSPH6AQ9H0K4 AC080038.1-201ENST00000611274 1154 ntBASIC28.2■■■□□ 2.1
RSPH6AQ9H0K4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC28.2■■■□□ 2.1
RSPH6AQ9H0K4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
RSPH6AQ9H0K4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC28.2■■■□□ 2.1
RSPH6AQ9H0K4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
RSPH6AQ9H0K4 GAS2L1P2-201ENST00000436355 1356 ntBASIC28.2■■■□□ 2.1
RSPH6AQ9H0K4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
RSPH6AQ9H0K4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC28.2■■■□□ 2.1
RSPH6AQ9H0K4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RSPH6AQ9H0K4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RSPH6AQ9H0K4 CDCA4P2-201ENST00000441182 718 ntBASIC28.19■■■□□ 2.1
RSPH6AQ9H0K4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RSPH6AQ9H0K4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
RSPH6AQ9H0K4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RSPH6AQ9H0K4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RSPH6AQ9H0K4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
RSPH6AQ9H0K4 FAM99A-202ENST00000538190 1989 ntBASIC28.19■■■□□ 2.1
RSPH6AQ9H0K4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
RSPH6AQ9H0K4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RSPH6AQ9H0K4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC28.18■■■□□ 2.1
RSPH6AQ9H0K4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC28.18■■■□□ 2.1
RSPH6AQ9H0K4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
RSPH6AQ9H0K4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC28.18■■■□□ 2.1
RSPH6AQ9H0K4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
RSPH6AQ9H0K4 MFSD11-216ENST00000590393 1141 ntBASIC28.18■■■□□ 2.1
RSPH6AQ9H0K4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RSPH6AQ9H0K4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC28.18■■■□□ 2.1
RSPH6AQ9H0K4 AC073111.5-205ENST00000641717 521 ntBASIC28.18■■■□□ 2.1
RSPH6AQ9H0K4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RSPH6AQ9H0K4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC28.18■■■□□ 2.1
RSPH6AQ9H0K4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC28.18■■■□□ 2.1
RSPH6AQ9H0K4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
RSPH6AQ9H0K4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
RSPH6AQ9H0K4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RSPH6AQ9H0K4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
RSPH6AQ9H0K4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RSPH6AQ9H0K4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RSPH6AQ9H0K4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RSPH6AQ9H0K4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC28.17■■■□□ 2.1
RSPH6AQ9H0K4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC28.17■■■□□ 2.1
RSPH6AQ9H0K4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC28.17■■■□□ 2.1
RSPH6AQ9H0K4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
RSPH6AQ9H0K4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
RSPH6AQ9H0K4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
RSPH6AQ9H0K4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
RSPH6AQ9H0K4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC28.17■■■□□ 2.1
RSPH6AQ9H0K4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RSPH6AQ9H0K4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RSPH6AQ9H0K4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RSPH6AQ9H0K4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC28.16■■■□□ 2.1
RSPH6AQ9H0K4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 1483 ms