Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nif3l1Q9EQ80 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nif3l1Q9EQ80 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nif3l1Q9EQ80 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Nif3l1Q9EQ80 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nif3l1Q9EQ80 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nif3l1Q9EQ80 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nif3l1Q9EQ80 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nif3l1Q9EQ80 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nif3l1Q9EQ80 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nif3l1Q9EQ80 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.6■□□□□ 0.57
Nif3l1Q9EQ80 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nif3l1Q9EQ80 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nif3l1Q9EQ80 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nif3l1Q9EQ80 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nif3l1Q9EQ80 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nif3l1Q9EQ80 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nif3l1Q9EQ80 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nif3l1Q9EQ80 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.59■□□□□ 0.57
Nif3l1Q9EQ80 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Nif3l1Q9EQ80 AV356131-201ENSMUST00000206201 750 ntBASIC18.59■□□□□ 0.57
Nif3l1Q9EQ80 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.59■□□□□ 0.57
Nif3l1Q9EQ80 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Nif3l1Q9EQ80 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nif3l1Q9EQ80 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nif3l1Q9EQ80 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nif3l1Q9EQ80 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nif3l1Q9EQ80 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nif3l1Q9EQ80 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nif3l1Q9EQ80 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nif3l1Q9EQ80 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nif3l1Q9EQ80 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nif3l1Q9EQ80 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Nif3l1Q9EQ80 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nif3l1Q9EQ80 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nif3l1Q9EQ80 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nif3l1Q9EQ80 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nif3l1Q9EQ80 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nif3l1Q9EQ80 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nif3l1Q9EQ80 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nif3l1Q9EQ80 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nif3l1Q9EQ80 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nif3l1Q9EQ80 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nif3l1Q9EQ80 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nif3l1Q9EQ80 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nif3l1Q9EQ80 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nif3l1Q9EQ80 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nif3l1Q9EQ80 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Nif3l1Q9EQ80 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nif3l1Q9EQ80 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Nif3l1Q9EQ80 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nif3l1Q9EQ80 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.57■□□□□ 0.56
Nif3l1Q9EQ80 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nif3l1Q9EQ80 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nif3l1Q9EQ80 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nif3l1Q9EQ80 BC021767-201ENSMUST00000126387 1716 ntBASIC18.57■□□□□ 0.56
Nif3l1Q9EQ80 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.57■□□□□ 0.56
Nif3l1Q9EQ80 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nif3l1Q9EQ80 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Nif3l1Q9EQ80 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nif3l1Q9EQ80 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Nif3l1Q9EQ80 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nif3l1Q9EQ80 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nif3l1Q9EQ80 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.56■□□□□ 0.56
Nif3l1Q9EQ80 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nif3l1Q9EQ80 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nif3l1Q9EQ80 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nif3l1Q9EQ80 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nif3l1Q9EQ80 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nif3l1Q9EQ80 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.56■□□□□ 0.56
Nif3l1Q9EQ80 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nif3l1Q9EQ80 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Nif3l1Q9EQ80 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
Nif3l1Q9EQ80 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nif3l1Q9EQ80 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nif3l1Q9EQ80 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.56■□□□□ 0.56
Nif3l1Q9EQ80 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nif3l1Q9EQ80 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nif3l1Q9EQ80 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nif3l1Q9EQ80 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nif3l1Q9EQ80 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nif3l1Q9EQ80 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nif3l1Q9EQ80 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nif3l1Q9EQ80 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nif3l1Q9EQ80 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nif3l1Q9EQ80 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nif3l1Q9EQ80 Gm26571-201ENSMUST00000181399 666 ntBASIC18.55■□□□□ 0.56
Nif3l1Q9EQ80 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.55■□□□□ 0.56
Nif3l1Q9EQ80 Gm7514-201ENSMUST00000209475 934 ntBASIC18.55■□□□□ 0.56
Nif3l1Q9EQ80 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nif3l1Q9EQ80 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nif3l1Q9EQ80 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nif3l1Q9EQ80 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nif3l1Q9EQ80 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nif3l1Q9EQ80 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.54■□□□□ 0.56
Nif3l1Q9EQ80 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nif3l1Q9EQ80 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nif3l1Q9EQ80 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nif3l1Q9EQ80 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.54■□□□□ 0.56
Nif3l1Q9EQ80 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms