Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmg20aQ9DC33 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmg20aQ9DC33 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.14■□□□□ 0.33
Hmg20aQ9DC33 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.14■□□□□ 0.33
Hmg20aQ9DC33 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmg20aQ9DC33 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmg20aQ9DC33 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Hmg20aQ9DC33 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hmg20aQ9DC33 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmg20aQ9DC33 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.13■□□□□ 0.33
Hmg20aQ9DC33 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Hmg20aQ9DC33 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmg20aQ9DC33 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmg20aQ9DC33 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmg20aQ9DC33 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hmg20aQ9DC33 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.13■□□□□ 0.33
Hmg20aQ9DC33 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.13■□□□□ 0.33
Hmg20aQ9DC33 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.13■□□□□ 0.33
Hmg20aQ9DC33 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmg20aQ9DC33 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Hmg20aQ9DC33 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmg20aQ9DC33 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmg20aQ9DC33 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmg20aQ9DC33 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hmg20aQ9DC33 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmg20aQ9DC33 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmg20aQ9DC33 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmg20aQ9DC33 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmg20aQ9DC33 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmg20aQ9DC33 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.12■□□□□ 0.33
Hmg20aQ9DC33 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Hmg20aQ9DC33 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmg20aQ9DC33 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmg20aQ9DC33 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmg20aQ9DC33 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.12■□□□□ 0.33
Hmg20aQ9DC33 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmg20aQ9DC33 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmg20aQ9DC33 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmg20aQ9DC33 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmg20aQ9DC33 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmg20aQ9DC33 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmg20aQ9DC33 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Hmg20aQ9DC33 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmg20aQ9DC33 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmg20aQ9DC33 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmg20aQ9DC33 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Hmg20aQ9DC33 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmg20aQ9DC33 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.11■□□□□ 0.33
Hmg20aQ9DC33 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hmg20aQ9DC33 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmg20aQ9DC33 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmg20aQ9DC33 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Hmg20aQ9DC33 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Hmg20aQ9DC33 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.1■□□□□ 0.33
Hmg20aQ9DC33 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmg20aQ9DC33 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmg20aQ9DC33 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmg20aQ9DC33 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmg20aQ9DC33 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmg20aQ9DC33 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hmg20aQ9DC33 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmg20aQ9DC33 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hmg20aQ9DC33 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmg20aQ9DC33 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmg20aQ9DC33 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hmg20aQ9DC33 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Hmg20aQ9DC33 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmg20aQ9DC33 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmg20aQ9DC33 Gm13238-201ENSMUST00000117655 780 ntBASIC17.09■□□□□ 0.33
Hmg20aQ9DC33 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.09■□□□□ 0.33
Hmg20aQ9DC33 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.09■□□□□ 0.33
Hmg20aQ9DC33 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.09■□□□□ 0.33
Hmg20aQ9DC33 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hmg20aQ9DC33 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmg20aQ9DC33 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmg20aQ9DC33 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmg20aQ9DC33 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmg20aQ9DC33 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmg20aQ9DC33 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.09■□□□□ 0.33
Hmg20aQ9DC33 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmg20aQ9DC33 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Hmg20aQ9DC33 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmg20aQ9DC33 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmg20aQ9DC33 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmg20aQ9DC33 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Hmg20aQ9DC33 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmg20aQ9DC33 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmg20aQ9DC33 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmg20aQ9DC33 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmg20aQ9DC33 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmg20aQ9DC33 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmg20aQ9DC33 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmg20aQ9DC33 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmg20aQ9DC33 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmg20aQ9DC33 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmg20aQ9DC33 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hmg20aQ9DC33 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmg20aQ9DC33 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.07■□□□□ 0.32
Hmg20aQ9DC33 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmg20aQ9DC33 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms