Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk3bl1Q9D701 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk3bl1Q9D701 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk3bl1Q9D701 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Upk3bl1Q9D701 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk3bl1Q9D701 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk3bl1Q9D701 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk3bl1Q9D701 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk3bl1Q9D701 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk3bl1Q9D701 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk3bl1Q9D701 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.03■□□□□ 0.32
Upk3bl1Q9D701 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Upk3bl1Q9D701 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk3bl1Q9D701 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Upk3bl1Q9D701 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk3bl1Q9D701 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk3bl1Q9D701 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk3bl1Q9D701 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk3bl1Q9D701 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk3bl1Q9D701 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.02■□□□□ 0.32
Upk3bl1Q9D701 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk3bl1Q9D701 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk3bl1Q9D701 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.02■□□□□ 0.32
Upk3bl1Q9D701 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.02■□□□□ 0.32
Upk3bl1Q9D701 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.02■□□□□ 0.32
Upk3bl1Q9D701 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Upk3bl1Q9D701 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk3bl1Q9D701 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.02■□□□□ 0.31
Upk3bl1Q9D701 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Upk3bl1Q9D701 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Upk3bl1Q9D701 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Upk3bl1Q9D701 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk3bl1Q9D701 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk3bl1Q9D701 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.01■□□□□ 0.31
Upk3bl1Q9D701 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Upk3bl1Q9D701 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.01■□□□□ 0.31
Upk3bl1Q9D701 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.01■□□□□ 0.31
Upk3bl1Q9D701 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk3bl1Q9D701 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk3bl1Q9D701 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Upk3bl1Q9D701 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Upk3bl1Q9D701 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk3bl1Q9D701 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk3bl1Q9D701 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk3bl1Q9D701 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk3bl1Q9D701 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.01■□□□□ 0.31
Upk3bl1Q9D701 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bl1Q9D701 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bl1Q9D701 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bl1Q9D701 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bl1Q9D701 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bl1Q9D701 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bl1Q9D701 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bl1Q9D701 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17■□□□□ 0.31
Upk3bl1Q9D701 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17■□□□□ 0.31
Upk3bl1Q9D701 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Upk3bl1Q9D701 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bl1Q9D701 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bl1Q9D701 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bl1Q9D701 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bl1Q9D701 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bl1Q9D701 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bl1Q9D701 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bl1Q9D701 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bl1Q9D701 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bl1Q9D701 Gm5898-201ENSMUST00000121016 2071 ntBASIC17■□□□□ 0.31
Upk3bl1Q9D701 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bl1Q9D701 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upk3bl1Q9D701 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Upk3bl1Q9D701 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Upk3bl1Q9D701 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Upk3bl1Q9D701 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.99■□□□□ 0.31
Upk3bl1Q9D701 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Upk3bl1Q9D701 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upk3bl1Q9D701 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Upk3bl1Q9D701 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upk3bl1Q9D701 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Upk3bl1Q9D701 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Upk3bl1Q9D701 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upk3bl1Q9D701 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upk3bl1Q9D701 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Upk3bl1Q9D701 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upk3bl1Q9D701 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upk3bl1Q9D701 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.98■□□□□ 0.31
Upk3bl1Q9D701 Etf1-202ENSMUST00000180351 108 ntBASIC16.98■□□□□ 0.31
Upk3bl1Q9D701 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Upk3bl1Q9D701 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upk3bl1Q9D701 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upk3bl1Q9D701 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upk3bl1Q9D701 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Upk3bl1Q9D701 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upk3bl1Q9D701 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upk3bl1Q9D701 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Upk3bl1Q9D701 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upk3bl1Q9D701 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upk3bl1Q9D701 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.97■□□□□ 0.31
Upk3bl1Q9D701 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Upk3bl1Q9D701 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.97■□□□□ 0.31
Upk3bl1Q9D701 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upk3bl1Q9D701 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms