Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Retreg3Q9CQV4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Retreg3Q9CQV4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retreg3Q9CQV4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retreg3Q9CQV4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.86■□□□□ 0.61
Retreg3Q9CQV4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retreg3Q9CQV4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retreg3Q9CQV4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retreg3Q9CQV4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retreg3Q9CQV4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Retreg3Q9CQV4 Gm27011-201ENSMUST00000182352 972 ntBASIC18.86■□□□□ 0.61
Retreg3Q9CQV4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retreg3Q9CQV4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.86■□□□□ 0.61
Retreg3Q9CQV4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Retreg3Q9CQV4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retreg3Q9CQV4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retreg3Q9CQV4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retreg3Q9CQV4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retreg3Q9CQV4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retreg3Q9CQV4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retreg3Q9CQV4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Retreg3Q9CQV4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retreg3Q9CQV4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retreg3Q9CQV4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retreg3Q9CQV4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retreg3Q9CQV4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retreg3Q9CQV4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retreg3Q9CQV4 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.85■□□□□ 0.61
Retreg3Q9CQV4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Retreg3Q9CQV4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retreg3Q9CQV4 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.85■□□□□ 0.61
Retreg3Q9CQV4 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.85■□□□□ 0.61
Retreg3Q9CQV4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retreg3Q9CQV4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Retreg3Q9CQV4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retreg3Q9CQV4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retreg3Q9CQV4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retreg3Q9CQV4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retreg3Q9CQV4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retreg3Q9CQV4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.84■□□□□ 0.61
Retreg3Q9CQV4 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.84■□□□□ 0.61
Retreg3Q9CQV4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg3Q9CQV4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.84■□□□□ 0.61
Retreg3Q9CQV4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg3Q9CQV4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg3Q9CQV4 Gm19891-201ENSMUST00000189771 303 ntBASIC18.84■□□□□ 0.61
Retreg3Q9CQV4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg3Q9CQV4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg3Q9CQV4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg3Q9CQV4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg3Q9CQV4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg3Q9CQV4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg3Q9CQV4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg3Q9CQV4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retreg3Q9CQV4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Retreg3Q9CQV4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retreg3Q9CQV4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.83■□□□□ 0.6
Retreg3Q9CQV4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.83■□□□□ 0.6
Retreg3Q9CQV4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retreg3Q9CQV4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Retreg3Q9CQV4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retreg3Q9CQV4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg3Q9CQV4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Retreg3Q9CQV4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg3Q9CQV4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg3Q9CQV4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg3Q9CQV4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg3Q9CQV4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg3Q9CQV4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg3Q9CQV4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Retreg3Q9CQV4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.82■□□□□ 0.6
Retreg3Q9CQV4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg3Q9CQV4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg3Q9CQV4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg3Q9CQV4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg3Q9CQV4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg3Q9CQV4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Retreg3Q9CQV4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.82■□□□□ 0.6
Retreg3Q9CQV4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Retreg3Q9CQV4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg3Q9CQV4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Retreg3Q9CQV4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg3Q9CQV4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg3Q9CQV4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg3Q9CQV4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg3Q9CQV4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.81■□□□□ 0.6
Retreg3Q9CQV4 Gm7514-201ENSMUST00000209475 934 ntBASIC18.81■□□□□ 0.6
Retreg3Q9CQV4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.81■□□□□ 0.6
Retreg3Q9CQV4 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.81■□□□□ 0.6
Retreg3Q9CQV4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg3Q9CQV4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg3Q9CQV4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg3Q9CQV4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.81■□□□□ 0.6
Retreg3Q9CQV4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg3Q9CQV4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg3Q9CQV4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retreg3Q9CQV4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retreg3Q9CQV4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retreg3Q9CQV4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.8■□□□□ 0.6
Retreg3Q9CQV4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms