Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga9Q91XX9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga9Q91XX9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga9Q91XX9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga9Q91XX9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga9Q91XX9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga9Q91XX9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga9Q91XX9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Pcdhga9Q91XX9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhga9Q91XX9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhga9Q91XX9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhga9Q91XX9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.52■□□□□ 0.56
Pcdhga9Q91XX9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhga9Q91XX9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhga9Q91XX9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhga9Q91XX9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhga9Q91XX9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhga9Q91XX9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhga9Q91XX9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhga9Q91XX9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga9Q91XX9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga9Q91XX9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga9Q91XX9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhga9Q91XX9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga9Q91XX9 Gm7514-201ENSMUST00000209475 934 ntBASIC18.51■□□□□ 0.55
Pcdhga9Q91XX9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga9Q91XX9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga9Q91XX9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga9Q91XX9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga9Q91XX9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga9Q91XX9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcdhga9Q91XX9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcdhga9Q91XX9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga9Q91XX9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhga9Q91XX9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga9Q91XX9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga9Q91XX9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga9Q91XX9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga9Q91XX9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhga9Q91XX9 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.5■□□□□ 0.55
Pcdhga9Q91XX9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga9Q91XX9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhga9Q91XX9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga9Q91XX9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhga9Q91XX9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga9Q91XX9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga9Q91XX9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga9Q91XX9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga9Q91XX9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga9Q91XX9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga9Q91XX9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga9Q91XX9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga9Q91XX9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga9Q91XX9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga9Q91XX9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga9Q91XX9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga9Q91XX9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga9Q91XX9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga9Q91XX9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga9Q91XX9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhga9Q91XX9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga9Q91XX9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga9Q91XX9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga9Q91XX9 Gm27011-201ENSMUST00000182352 972 ntBASIC18.48■□□□□ 0.55
Pcdhga9Q91XX9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.48■□□□□ 0.55
Pcdhga9Q91XX9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga9Q91XX9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga9Q91XX9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga9Q91XX9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga9Q91XX9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga9Q91XX9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhga9Q91XX9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga9Q91XX9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga9Q91XX9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga9Q91XX9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga9Q91XX9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga9Q91XX9 Gm13534-201ENSMUST00000121169 513 ntBASIC18.47■□□□□ 0.55
Pcdhga9Q91XX9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga9Q91XX9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.47■□□□□ 0.55
Pcdhga9Q91XX9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga9Q91XX9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Pcdhga9Q91XX9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga9Q91XX9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Pcdhga9Q91XX9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga9Q91XX9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhga9Q91XX9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga9Q91XX9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhga9Q91XX9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhga9Q91XX9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga9Q91XX9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga9Q91XX9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhga9Q91XX9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga9Q91XX9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga9Q91XX9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga9Q91XX9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga9Q91XX9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga9Q91XX9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhga9Q91XX9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhga9Q91XX9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Pcdhga9Q91XX9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms