Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb11Q91UZ8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb11Q91UZ8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb11Q91UZ8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb11Q91UZ8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb11Q91UZ8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb11Q91UZ8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhb11Q91UZ8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb11Q91UZ8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.2■□□□□ 0.66
Pcdhb11Q91UZ8 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.2■□□□□ 0.66
Pcdhb11Q91UZ8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.2■□□□□ 0.66
Pcdhb11Q91UZ8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb11Q91UZ8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb11Q91UZ8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb11Q91UZ8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhb11Q91UZ8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb11Q91UZ8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb11Q91UZ8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhb11Q91UZ8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb11Q91UZ8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb11Q91UZ8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhb11Q91UZ8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb11Q91UZ8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb11Q91UZ8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb11Q91UZ8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb11Q91UZ8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb11Q91UZ8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb11Q91UZ8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb11Q91UZ8 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.18■□□□□ 0.66
Pcdhb11Q91UZ8 Gm42569-201ENSMUST00000200539 472 ntBASIC19.18■□□□□ 0.66
Pcdhb11Q91UZ8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.18■□□□□ 0.66
Pcdhb11Q91UZ8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb11Q91UZ8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb11Q91UZ8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Pcdhb11Q91UZ8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb11Q91UZ8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.18■□□□□ 0.66
Pcdhb11Q91UZ8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb11Q91UZ8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb11Q91UZ8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb11Q91UZ8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb11Q91UZ8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhb11Q91UZ8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb11Q91UZ8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.17■□□□□ 0.66
Pcdhb11Q91UZ8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhb11Q91UZ8 Gm7514-201ENSMUST00000209475 934 ntBASIC19.17■□□□□ 0.66
Pcdhb11Q91UZ8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb11Q91UZ8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb11Q91UZ8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb11Q91UZ8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhb11Q91UZ8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Pcdhb11Q91UZ8 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.17■□□□□ 0.66
Pcdhb11Q91UZ8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
Pcdhb11Q91UZ8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhb11Q91UZ8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb11Q91UZ8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhb11Q91UZ8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb11Q91UZ8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb11Q91UZ8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb11Q91UZ8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb11Q91UZ8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb11Q91UZ8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.16■□□□□ 0.66
Pcdhb11Q91UZ8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhb11Q91UZ8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Pcdhb11Q91UZ8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb11Q91UZ8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb11Q91UZ8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhb11Q91UZ8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdhb11Q91UZ8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb11Q91UZ8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb11Q91UZ8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb11Q91UZ8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb11Q91UZ8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb11Q91UZ8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb11Q91UZ8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb11Q91UZ8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb11Q91UZ8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdhb11Q91UZ8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb11Q91UZ8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb11Q91UZ8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb11Q91UZ8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb11Q91UZ8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb11Q91UZ8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb11Q91UZ8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb11Q91UZ8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb11Q91UZ8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb11Q91UZ8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb11Q91UZ8 Iqck-206ENSMUST00000208658 2891 ntBASIC19.15■□□□□ 0.66
Pcdhb11Q91UZ8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdhb11Q91UZ8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb11Q91UZ8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb11Q91UZ8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb11Q91UZ8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb11Q91UZ8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb11Q91UZ8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Pcdhb11Q91UZ8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb11Q91UZ8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb11Q91UZ8 BC021767-201ENSMUST00000126387 1716 ntBASIC19.14■□□□□ 0.65
Pcdhb11Q91UZ8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb11Q91UZ8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb11Q91UZ8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms