Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Chrna3Q8R4G9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chrna3Q8R4G9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chrna3Q8R4G9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chrna3Q8R4G9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chrna3Q8R4G9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chrna3Q8R4G9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chrna3Q8R4G9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chrna3Q8R4G9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.39■□□□□ 0.53
Chrna3Q8R4G9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Chrna3Q8R4G9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrna3Q8R4G9 Iqck-206ENSMUST00000208658 2891 ntBASIC18.38■□□□□ 0.53
Chrna3Q8R4G9 Golph3-202ENSMUST00000226517 2359 ntBASIC18.38■□□□□ 0.53
Chrna3Q8R4G9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chrna3Q8R4G9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrna3Q8R4G9 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.38■□□□□ 0.53
Chrna3Q8R4G9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrna3Q8R4G9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrna3Q8R4G9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Chrna3Q8R4G9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chrna3Q8R4G9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrna3Q8R4G9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrna3Q8R4G9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrna3Q8R4G9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.38■□□□□ 0.53
Chrna3Q8R4G9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrna3Q8R4G9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chrna3Q8R4G9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chrna3Q8R4G9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.37■□□□□ 0.53
Chrna3Q8R4G9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chrna3Q8R4G9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chrna3Q8R4G9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chrna3Q8R4G9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chrna3Q8R4G9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chrna3Q8R4G9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Chrna3Q8R4G9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Chrna3Q8R4G9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chrna3Q8R4G9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.36■□□□□ 0.53
Chrna3Q8R4G9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chrna3Q8R4G9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chrna3Q8R4G9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chrna3Q8R4G9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.36■□□□□ 0.53
Chrna3Q8R4G9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Chrna3Q8R4G9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.36■□□□□ 0.53
Chrna3Q8R4G9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chrna3Q8R4G9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.36■□□□□ 0.53
Chrna3Q8R4G9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chrna3Q8R4G9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chrna3Q8R4G9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chrna3Q8R4G9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chrna3Q8R4G9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chrna3Q8R4G9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chrna3Q8R4G9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chrna3Q8R4G9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chrna3Q8R4G9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chrna3Q8R4G9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chrna3Q8R4G9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna3Q8R4G9 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.35■□□□□ 0.53
Chrna3Q8R4G9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna3Q8R4G9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna3Q8R4G9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Chrna3Q8R4G9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna3Q8R4G9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Chrna3Q8R4G9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna3Q8R4G9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna3Q8R4G9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna3Q8R4G9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna3Q8R4G9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Chrna3Q8R4G9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.35■□□□□ 0.53
Chrna3Q8R4G9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
Chrna3Q8R4G9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna3Q8R4G9 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.35■□□□□ 0.53
Chrna3Q8R4G9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna3Q8R4G9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna3Q8R4G9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna3Q8R4G9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrna3Q8R4G9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chrna3Q8R4G9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrna3Q8R4G9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrna3Q8R4G9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrna3Q8R4G9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrna3Q8R4G9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Chrna3Q8R4G9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrna3Q8R4G9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrna3Q8R4G9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chrna3Q8R4G9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Chrna3Q8R4G9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chrna3Q8R4G9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Chrna3Q8R4G9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.33■□□□□ 0.53
Chrna3Q8R4G9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
Chrna3Q8R4G9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chrna3Q8R4G9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.33■□□□□ 0.52
Chrna3Q8R4G9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chrna3Q8R4G9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Chrna3Q8R4G9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Chrna3Q8R4G9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chrna3Q8R4G9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Chrna3Q8R4G9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chrna3Q8R4G9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chrna3Q8R4G9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chrna3Q8R4G9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms